Flavobacterium columnare C#2 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Flavobacterium columnare C#2 RM systems
Ref: Bartelme,R.P. et al. unpublished
REBASE ref # 22129
Complete sequence: 3,329,120 bp
GenBank #: CP015107
REBASE acronym: FcoC2
Org_num: 18975
All begin AX766_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1525 | 301 aa hypothetical protein | |||
| 1530 | R | Fco81ORF8535P (100% identity) | FcoC2ORF1545P | |
| 1535 | 151 aa hypothetical protein | |||
| 1540 | S | S.Fco81ORF8535P (100% identity) | S.FcoC2ORF1545P | |
| 1545 | M | M.Fco81ORF8535P (100% identity) | M.FcoC2ORF1545P | |
| 1550 | 157 aa hypothetical protein | |||
| 12645 | excinuclease ABC subunit A | |||
| 12650 | R | Fco81ORF4045P (98% identity) | FcoC2ORF12665P | |
| 12655 | 253 aa hypothetical protein | |||
| 12660 | S | S.Fco81ORF4045P (100% identity) | S.FcoC2ORF12665P | |
| 12665 | M | M.Fco81ORF4045P (98% identity) | M.FcoC2ORF12665P | |
| 12670 | integrase | |||
| 12690 | 283 aa hypothetical protein | |||
| 12695 | M | M.FenDK69ORF7375P (79% identity) | M.FcoC2ORF12695P | |
| 12700 | S | S.Fsp0048ORF7330P (38% identity) | S.FcoC2ORF12695P | |
| 12705 | 188 aa hypothetical protein | |||
| 12710 | 159 aa hypothetical protein | |||
| 12715 | 143 aa hypothetical protein | |||
| 12720 | R | Psp88IP (82% identity) | FcoC2ORF12695P | |
| 12725 | 479 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 780 | 380 aa hypothetical protein | |||
| 785 | R | Fco81ORF7780P (99% identity) | ATGCAT | FcoC2ORF790P |
| 790 | M | M.Fco81ORF7780P (100% identity) | ATGCAT | M.FcoC2ORF790P |
| 795 | 283 aa hypothetical protein | |||
| 800 | 188 aa hypothetical protein | |||
| 805 | M | M.FcoPf1ORF2557P (100% identity) | CTCGAG | M.FcoC2ORF805P |
| 810 | R | FcoPf1ORF2557P (100% identity) | CTCGAG | FcoC2ORF805P |
| 815 | 322 aa hypothetical protein | |||
| 1465 | isocitrate dehydrogenase | |||
| 1470 | M | M.Fco0236ORF9780P (92% identity) | GAATTC | M.FcoC2ORF1470P |
| 1475 | R | Fco0236ORF9780P (90% identity) | GAATTC | FcoC2ORF1470P |
| 1480 | thiamine pyrophosphokinase | |||
| 8715 | 236 aa hypothetical protein | |||
| 8720 | RM | Fsp7310ORF10320P (68% identity) | FcoC2ORF8720P | |
| 8725 | 131 aa hypothetical protein | |||
| 11695 | OstA-like protein | |||
| 11700 | R | Fco81ORF5010P (100% identity) | FcoC2ORF11705P | |
| 11705 | M | M.Fco81ORF5010P (96% identity) | M.FcoC2ORF11705P | |
| 11710 | iron-sulfur cluster repair di-iron protein | |||
| 12295 | 694 aa hypothetical protein | |||
| 12300 | M | M.Fco0236ORF14420P (97% identity) | CTGAAG | M.FcoC2ORF12300P |
| 12305 | RM | Fco0236ORF14420P (96% identity) | CTGAAG | FcoC2ORF12300P |
| 12310 | transcriptional regulator | |||