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Putative Bacteroides dorei CL03T12C01 RM systems
Ref: Russell,J.T. and Davis-Richardson,A.G. unpublished
REBASE ref # 21792
Complete sequence: 5,310,365 bp
GenBank #: CP011531
REBASE acronym: Bdo12C01
Org_num: 13637
All begin ABI39_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
1755 | S-adenosylmethionine tRNA ribosyltransferase | |||
1760 | M | M.PmeBin22ORFCP (99% identity) | M.Bdo12C01ORF3417P | |
1765 | S | S1.Pdo2ORF20950P (79% identity) | S1.Bdo12C01ORF3417P | |
1770 | transposase | |||
1775 | 150 aa hypothetical protein | |||
1780 | 172 aa hypothetical protein | |||
1785 | 191 aa hypothetical protein | |||
1790 | S | 77 aa hypothetical protein | S2.Bdo12C01ORF3417P | |
1795 | 364 aa hypothetical protein | |||
1800 | R | Pdo1047IP (100% identity) | Bdo12C01ORF3417P | |
1805 | 343 aa hypothetical protein | |||
21410 | cell surface protein | |||
21415 | S | S2.Pdo1ORF14765P (88% identity) | S1.Bdo12C01ORF1796P | |
21420 | pseudogene | |||
21425 | S | S4.Pdo2ORF18935P (100% identity) | S2.Bdo12C01ORF1796P | |
21430 | S | S2.Pdo1047II (99% identity) | S3.Bdo12C01ORF1796P | |
21435 | 50S ribosomal protein L31 | |||
21440 | M | M.Pdo1047II (100% identity) | M.Bdo12C01ORF1796P | |
21445 | R | Bdo5136ORF1333P (99% identity) | Bdo12C01ORF1796P | |
21450 | C | C.Pvu201ORF22395P (100% identity) | C.Bdo12C01ORF1796P | |
21455 | methionine sulfoxide reductase | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
3090 | 359 aa hypothetical protein | |||
3095 | M | DNA (cytosine-5-)-methyltransferase | RCCGGY | M.Bdo12C01ORF3095P |
3100 | 72 aa hypothetical protein | |||
7510 | 124 aa hypothetical protein | |||
7515 | M | M.Bfr1985ORF18580P (66% identity) | YGGCCR | M.Bdo12C01ORF7490P |
7520 | 53 aa hypothetical protein HMPREF1065_02891 | |||
14030 | pseudogene | |||
14035 | R | Pdo17855ORF15140P (100% identity) | GGTNACC | Bdo12C01ORF770P |
14040 | M | M.Pdo17855ORF15140P (100% identity) | GGTNACC | M.Bdo12C01ORF770P |
14045 | 104 aa hypothetical protein | |||
15810 | 130 aa hypothetical protein | |||
15815 | M | M.BdoB010ORF11455P (98% identity) | M.Bdo12C01ORF412P | |
15820 | 78 aa hypothetical protein | |||
18410 | 288 aa hypothetical protein | |||
18415 | C | C.Pdo3C03ORF1413P (98% identity) | C.Bdo12C01ORF18420P | |
18420 | M | M.Pdo3C03ORF1413P (100% identity) | M.Bdo12C01ORF18420P | |
18425 | S | S.Pdo2ORF16265P (100% identity) | S.Bdo12C01ORF18420P | |
18430 | 1383 aa hypothetical protein | |||
18415 | pseudogene | |||
18420 | M | M.Pdo3C03ORF1413P (100% identity) | M.Bdo12C01ORF3632P | |
18425 | S | S.Pdo2ORF16265P (100% identity) | S.Bdo12C01ORF3632P | |
18430 | 1383 aa hypothetical protein | |||
19475 | 178 aa hypothetical protein | |||
19480 | M | M.Pvu191ORF10140P (86% identity) | M.Bdo12C01ORF19480P | |
19485 | 139 aa hypothetical protein | |||
19520 | 70 aa hypothetical protein | |||
19525 | M | M.Pvu1099ORF11120P (86% identity) | M.Bdo12C01ORF19525P | |
19530 | 115 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
6780 | 297 aa hypothetical protein | |||
6785 | C | C.Pme12C32ORF2646P (100% identity) | C.Bdo12C01ORF3284P | |
6790 | M | M.Pme12C32ORF2646P (100% identity) | M.Bdo12C01ORF3284P | |
6795 | toxin Fic | |||
6800 | R | Pme12C32ORF2646P (99% identity) | Bdo12C01ORF3284P | |
6805 | 72 aa hypothetical protein |