Ref: Hughes,H.Y. et al. J. Clin. Microbiol. 54 (4), 1167-1170 (2016)

REBASE ref # 21802

Sequence length:GenBank #:
Chromosome: 4,756,751 bp CP014774
plasmid pASP-a58: 198,307 bp CP014775

REBASE acronym: AveNIH1

Org_num: 18956

 

All begin WM43_

Type I
ORF Gene Most similar Specificity Name
 
Chromosome
 
3780 virulence factor
3785 S S1.Ave18196ORFCP (93% identity) S1.AveNIH1IIP
3790 M M.Ave18196ORFBP (100% identity) TAAGNNNNNRTAY M.AveNIH1II
3795 S S1.Ave18196ORFBP (100% identity) TAAGNNNNNRTAY S2.AveNIH1II
3800 228 aa hypothetical protein
3805 ATPase
3810 497 aa hypothetical protein
3815 R Ave18196ORFBP (99% identity) TAAGNNNNNRTAY AveNIH1IIP
3820 metal-dependent hydrolase
 
20590 glycine dehydrogenase
20595 S S3.Ame119ORF13275P (99% identity) S1.AveNIH1IP
20600 M M.Ave5ORF6800P (100% identity) ACCANNNNNNRTAY M.AveNIH1I
20605 S S1.Ave5ORF6800P (100% identity) ACCANNNNNNRTAY S2.AveNIH1I
20610 228 aa hypothetical protein
20615 ATPase
20620 497 aa hypothetical protein
20625 R Ave5ORF6800P (99% identity) ACCANNNNNNRTAY AveNIH1IP
20630 metal-dependent hydrolase
Type II
ORF Gene Most similar Specificity Name
 
Chromosome
 
7840 146 aa hypothetical protein
7845 M M.Squ11544ORF1114P (93% identity) M.AveNIH1ORF7845P
7850 197 aa hypothetical protein
 
17955 cell division protein DamX
17960 M M.AveZfB1DamP (100% identity) M.AveNIH1DamP
17965 ribulose-phosphate 3-epimerase
 
20155 recombination-associated protein RdgC
20160 M M.AcaSVJ23ORF14825P (100% identity) M.AveNIH1ORF20160P
20165 405 aa hypothetical protein
 
20230 72 aa hypothetical protein
20235 M M.AveWP3ORF18850P (99% identity) M.AveNIH1ORF20235P
20240 334 aa hypothetical protein
 
plasmid pASP-a58
 
21675 100 aa hypothetical protein
21680 M M.YrupYR1ORFCP (100% identity) CCNGG M.AveNIH1ORF21680P
21685 143 aa hypothetical protein
Type III
ORF Gene Most similar Specificity Name
 
Chromosome
 
65 restriction endonuclease
70 R Adh1ORF5440P (98% identity) AveNIH1ORF75P
75 M M.Adh1ORF5440P (100% identity) M.AveNIH1ORF75P
80 0 aa hypothetical protein
 
3970 327 aa hypothetical protein
3975 M M.AhyD4ORF23035P (100% identity) CRACAG M.AveNIH1III
3980 R AhyD4ORF23035P (99% identity) CRACAG AveNIH1IIIP
3985 0 aa hypothetical protein
Type IV
ORF Gene Most similar Specificity Name
 
Chromosome
 
60 integrase
65 R Adh1MrrP (98% identity) AveNIH1MrrP
70 restriction endonuclease subunit R
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