Propionibacterium freudenreichii JS |
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Putative Propionibacterium freudenreichii JS RM systems
Ref: Laine KS,Pia. unpublished
REBASE ref # 21841
Complete sequence: 2,675,045 bp
GenBank #: LN997841
REBASE acronym: PfrJS
Org_num: 18994
All begin PFREUDJS001_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 52 | DNA polymerase III epsilon subunit | |||
| 53 | R | PfrPBF01ORFBP (100% identity) | PfrJSORF55P | |
| 54 | Type I restriction-modification system, DNA | |||
| ??? | Type I restriction enzyme | |||
| 55 | M | M.PfrJS10ORF2151BP (100% identity) | M.PfrJSORF55BP | |
| 56 | Transposase | |||
| ??? | M | M.PfrPBF01ORFBAP (100% identity) | M.PfrJSORF55AP | |
| 57 | ABC transporter, ATP-binding protein | |||
| 917 | R | PfrJS2IIP (100% identity) | AGTNNNNNNCTT | PfrJSIIP |
| 918 | HigA family addiction module antidote protein | |||
| 919 | Killer suppression protein HigA | |||
| ??? | S | S.PfrPBF01ORFEP (100% identity) | AGTNNNNNNCTT | S.PfrJSII |
| 921 | M | M.PfrJS2II (100% identity) | AGTNNNNNNCTT | M.PfrJSII |
| 922 | protein without homology | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 594 | conserved protein | |||
| 595 | M | Pfr508ORF820P (33% identity) | M.PfrJSORF595P | |
| 596 | protein without homology | |||
| 866 | Membrane protein | |||
| 867 | RM | PfrPBF01ORFHP (100% identity) | PfrJSORF867P | |
| 868 | DUF262 protein | |||
| 868 | DUF262 protein | |||
| ??? | M | M.PfrPBF01ORFGP (100% identity) | M.PfrJSORF869P | |
| 872 | Conjugal transfer protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 564 | conserved protein | |||
| 565 | R | PfrUF1IP (99% identity) | AGCAGY | PfrJSIP |
| 566 | M | M.PfrUF1I (100% identity) | AGCAGY | M.PfrJSI |
| 567 | Type I restriction-modification system, | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2156 | Anaerobic C4-dicarboxylate transporter | |||
| 2157 | R | PfrJS10ORF1814P (100% identity) | PfrJSORF2157P | |
| 2158 | conserved protein | |||