Salmonella enterica subsp. enterica serovar Typhimurium USDA-ARS-USMARC-1906 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium USDA-ARS-USMARC-1906 RM systems
Ref: Nguyen,S.V. et al. unpublished
REBASE ref # 21729
| Sequence length: | GenBank #: | |
| Chromosome: | 4,933,707 bp | CP014975 |
| plasmid pSTY1-2009K-1640: | 94,019 bp | CP014976 |
REBASE acronym: Sen1906
Org_num: 18912
All begin AX07_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20715 | restriction endonuclease | |||
| 20720 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen1906IIP |
| 20725 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen1906II |
| 20730 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen1906II |
| 20735 | 110 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2165 | cell division protein DamX | |||
| 2170 | M | DNA adenine methylase | GATC | M.Sen1906DamP |
| 2175 | ribulose-phosphate 3-epimerase | |||
| 2660 | 54 aa hypothetical protein | |||
| 2665 | M | methyltransferase | ATGCAT | M.Sen1906III |
| 2670 | Fis family transcriptional regulator | |||
| 6320 | 160 aa hypothetical protein | |||
| 6325 | M | M.Sty13348ORF110P (100% identity) | GATC | M.Sen1906ORF6325P |
| 6330 | crossover junction endodeoxyribonuclease | |||
| 9805 | hydrolase | |||
| 9810 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen1906DcmP |
| 9815 | V | V.StyUK1DcmP (100% identity) | V.Sen1906DcmP | |
| 9820 | drug/metabolite exporter YedA | |||
| 20885 | DNA repair protein | |||
| 20890 | RM | StyUK1IV (100% identity) | GATCAG | Sen1906IV |
| 20895 | 363 aa hypothetical protein | |||
| plasmid pSTY1-2009K-1640 | ||||
| 24285 | 62 aa hypothetical protein | |||
| 24290 | M | M.StyUK1ORFAP (100% identity) | M.Sen1906ORF24290P | |
| 24295 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18250 | 33 aa hypothetical protein | |||
| 18255 | R | StyUK1IP (99% identity) | CAGAG | Sen1906IP |
| 18260 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen1906I |
| 18265 | sugar transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20710 | 95 aa hypothetical protein | |||
| 20715 | R | StyUK1MrrP (100% identity) | Sen1906MrrP | |
| 20720 | DEAD/DEAH box helicase | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9590 | 160 aa hypothetical protein | |||
| 9595 | M | M.StyUK1V (100% identity) | GATC | M.Sen1906ORF9595P |
| 9600 | crossover junction endodeoxyribonuclease | |||