Salmonella enterica subsp. enterica serovar Typhimurium USDA-ARS-USMARC-1910 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium USDA-ARS-USMARC-1910 RM systems
Ref: Nguyen,S.V. et al. unpublished
REBASE ref # 21729
| Sequence length: | GenBank #: | |
| Chromosome: | 4,906,321 bp | CP014967 |
| plasmid pSTY1-2011K-1702: | 94,016 bp | CP014968 |
REBASE acronym: Sen1910
Org_num: 18900
All begin AX06_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21065 | restriction endonuclease | |||
| 21070 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen1910IIP |
| 21075 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen1910II |
| 21080 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen1910II |
| 21085 | 110 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2730 | cell division protein DamX | |||
| 2735 | M | DNA adenine methylase | GATC | M.Sen1910DamP |
| 2740 | ribulose-phosphate 3-epimerase | |||
| 3225 | 54 aa hypothetical protein | |||
| 3230 | M | methyltransferase | ATGCAT | M.Sen1910III |
| 3235 | Fis family transcriptional regulator | |||
| 6890 | 160 aa hypothetical protein | |||
| 6895 | M | M.Sty13348ORF110P (100% identity) | GATC | M.Sen1910ORF6895P |
| 6900 | crossover junction endodeoxyribonuclease | |||
| 10375 | hydrolase | |||
| 10380 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen1910DcmP |
| 10385 | V | V.StyUK1DcmP (100% identity) | V.Sen1910DcmP | |
| 10390 | drug/metabolite exporter YedA | |||
| 21235 | DNA repair protein | |||
| 21240 | RM | StyUK1IV (100% identity) | GATCAG | Sen1910IV |
| 21245 | 363 aa hypothetical protein | |||
| plasmid pSTY1-2011K-1702 | ||||
| 305 | 62 aa hypothetical protein | |||
| 310 | M | M.StyUK1ORFAP (100% identity) | M.Sen1910ORF310P | |
| 315 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18815 | 33 aa hypothetical protein | |||
| 18820 | R | StyUK1IP (99% identity) | CAGAG | Sen1910IP |
| 18825 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen1910I |
| 18830 | sugar transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21060 | 95 aa hypothetical protein | |||
| 21065 | R | StyUK1MrrP (100% identity) | Sen1910Mrr2P | |
| 21070 | DEAD/DEAH box helicase | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10160 | 160 aa hypothetical protein | |||
| 10165 | M | M.StyUK1V (100% identity) | GATC | M.Sen1910ORF10165P |
| 10170 | crossover junction endodeoxyribonuclease | |||