Salmonella enterica subsp. enterica serovar Typhimurium USDA-ARS-USMARC-1810 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium USDA-ARS-USMARC-1810 RM systems
Ref: Nguyen,S.V. et al. unpublished
REBASE ref # 21729
Complete sequence: 4,927,145 bp
GenBank #: CP014982
REBASE acronym: SenC1810
Org_num: 18915
All begin AW45_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 20485 | restriction endonuclease | |||
| 20490 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | SenC1810IIP |
| 20495 | M | M.StyUK1II (100% identity) | GAGNNNNNNRTAYG | M.SenC1810II |
| 20500 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenC1810II |
| 20505 | 110 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1970 | cell division protein DamX | |||
| 1975 | M | M.SenRM079Dam3P (100% identity) | GATC | M.SenC1810DamP |
| 1980 | ribulose-phosphate 3-epimerase | |||
| 1970 | SPOR domain-containing protein | |||
| 1975 | M | M.StyTDamP (100% identity) | GATC | M.SenC1810Dam2P |
| 1980 | ribulose-phosphate 3-epimerase | |||
| 2465 | DUF2556 domain-containing protein | |||
| 2470 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenC1810III |
| 2475 | Fis family transcriptional regulator | |||
| 9835 | phosphohydrolase | |||
| 9840 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.SenC1810DcmP |
| 9845 | V | V.StyUK1DcmP (100% identity) | V.SenC1810DcmP | |
| 9850 | amino acid exporter | |||
| 16100 | 149 aa hypothetical protein | |||
| 16105 | M | M.Sen408ORFBP (100% identity) | M.SenC1810ORF16105P | |
| 16110 | 131 aa hypothetical protein | |||
| 20655 | DNA repair protein | |||
| 20660 | RM | StyUK1IV (100% identity) | GATCAG | SenC1810IV |
| 20665 | 363 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 25845 | 33 aa hypothetical protein | |||
| 18295 | R | StyUK1IP (99% identity) | CAGAG | SenC1810IP |
| 18300 | M | M.StyUK1I (100% identity) | CAGAG | M.SenC1810I |
| 18305 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20480 | 95 aa hypothetical protein | |||
| 20485 | R | StyUK1MrrP (100% identity) | SenC1810Mrr2P | |
| 20490 | type I restriction-modification system | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9620 | 160 aa hypothetical protein | |||
| 9625 | M | M.StyUK1V (100% identity) | GATC | M.SenC1810ORF9625P |
| 9630 | 129 aa hypothetical protein | |||