Salmonella enterica subsp. enterica serovar Anatum USDA-ARS-USMARC-1736 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Anatum USDA-ARS-USMARC-1736 RM systems
Ref: Nguyen,S.V. et al. unpublished
REBASE ref # 21729
| Sequence length: | GenBank #: | |
| Chromosome: | 4,704,371 bp | CP014657 |
| plasmid pSAN1-1736: | 160,227 bp | CP014658 |
REBASE acronym: SenC1736
Org_num: 18888
All begin AW51_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19535 | restriction endonuclease | |||
| 19540 | R | SenNCTR462ORF2380P (100% identity) | CCANNNNNNNNTGAG | SenC1736IIP |
| ??? | M | M.SenNCTR462ORF2380P (100% identity) | CCANNNNNNNNTGAG | M.SenC1736II |
| 19550 | S | S.SenNCTR462ORF2380P (100% identity) | CCANNNNNNNNTGAG | S.SenC1736II |
| 19555 | 110 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1950 | cell division protein DamX | |||
| 1955 | M | M.StyTDamP (100% identity) | GATC | M.SenC1736DamP |
| 1960 | ribulose-phosphate 3-epimerase | |||
| 2440 | 54 aa hypothetical protein | |||
| 2445 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenC1736III |
| 2450 | Fis family transcriptional regulator | |||
| 5650 | 75 aa hypothetical protein | |||
| 5655 | M | M.SenSL491ORF2393P (100% identity) | GATC | M.SenC1736ORF5655P |
| 5660 | endonuclease | |||
| 9105 | hydrolase | |||
| 9110 | M | M.SenNCTR462DcmP (100% identity) | CCWGG | M.SenC1736DcmP |
| 9115 | V | V.StyUK1DcmP (100% identity) | V.SenC1736DcmP | |
| 9120 | drug/metabolite exporter YedA | |||
| 14165 | exonuclease | |||
| 14170 | M | M.SenSW70ORF5830P (100% identity) | GATC | M.SenC1736ORF14170P |
| 14175 | 79 aa hypothetical protein | |||
| plasmid pSAN1-1736 | ||||
| 23290 | 100 aa hypothetical protein | |||
| 23295 | M | M.YrupYR1ORFCP (100% identity) | CCNGG | M2.SenC1736ORF23250P |
| 23300 | 143 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17325 | 33 aa hypothetical protein | |||
| ??? | R | SenNCTR462ORF9180P (100% identity) | CAGAG | SenC1736IP |
| 17335 | M | M.SenST224ORF2660P (100% identity) | CAGAG | M.SenC1736I |
| 17340 | sugar transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19530 | 95 aa hypothetical protein | |||
| 19535 | R | SenNCTR462MrrP (100% identity) | SenC1736MrrP | |
| 19540 | DEAD/DEAH box helicase | |||
| 19530 | 95 aa hypothetical protein | |||
| 19535 | R | SenNCTR462MrrP (100% identity) | SenC1736Mrr2P | |
| 19540 | DEAD/DEAH box helicase | |||