Salmonella enterica subsp. enterica serovar Anatum USDA-ARS-USMARC-1727 |
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Putative Salmonella enterica subsp. enterica serovar Anatum USDA-ARS-USMARC-1727 RM systems
Ref: Nguyen,S.V. et al. unpublished
REBASE ref # 21729
| Sequence length: | GenBank #: | |
| Chromosome: | 4,883,499 bp | CP014621 |
| plasmid pSAN1-1727: | 97,041 bp | CP014622 |
REBASE acronym: SenC1727
Org_num: 18886
All begin AW49_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20500 | restriction endonuclease | |||
| 20505 | R | SenNCTR462ORF2380P (100% identity) | CCANNNNNNNNTGAG | SenC1727IP |
| ??? | M | M.SenNCTR462ORF2380P (100% identity) | CCANNNNNNNNTGAG | M.SenC1727I |
| 20515 | S | S.SenNCTR462ORF2380P (100% identity) | CCANNNNNNNNTGAG | S.SenC1727I |
| 20520 | 110 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1960 | cell division protein DamX | |||
| 1965 | M | M.StyTDamP (100% identity) | GATC | M.SenC1727DamP |
| 1970 | ribulose-phosphate 3-epimerase | |||
| 2450 | DUF2556 domain-containing protein | |||
| 2455 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenC1727III |
| 2460 | Fis family transcriptional regulator | |||
| 5670 | 75 aa hypothetical protein | |||
| 5675 | M | M.SenSH7ORF6070P (100% identity) | GATC | M.SenC1727ORF5675P |
| 5680 | endonuclease | |||
| 5690 | 62 aa hypothetical protein | |||
| 5695 | M | M.SenSH7ORF6090P (100% identity) | CGGCCG | M.SenC1727ORF5695P |
| 5700 | R | SenS16ORF16875P (100% identity) | CGGCCG | SenC1727ORF5695P |
| 5705 | phage portal protein | |||
| 9130 | phosphohydrolase | |||
| 9135 | M | M.SenNCTR462DcmP (100% identity) | CCWGG | M.SenC1727DcmP |
| 9140 | V | V.StyUK1DcmP (100% identity) | V.SenC1727DcmP | |
| 9145 | drug/metabolite exporter YedA | |||
| 9750 | HNH endonuclease | |||
| 9755 | M | M.SensSPORFEP (100% identity) | M.SenC1727ORF9755P | |
| 9760 | 130 aa hypothetical protein | |||
| 13530 | 129 aa hypothetical protein | |||
| 13535 | M | M.SenS16ORF9325P (100% identity) | GATC | M.SenC1727ORF13535P |
| 13540 | 160 aa hypothetical protein | |||
| 25325 | 243 aa hypothetical protein | |||
| 13600 | M | M.SenSH7ORF6615P (100% identity) | M.SenC1727ORF13600P | |
| 13605 | Eaa protein | |||
| 18440 | 71 aa hypothetical protein | |||
| 18445 | M | M.SenST350ORF15060P (100% identity) | M.SenC1727ORF18445P | |
| 18450 | nuclease | |||
| 22105 | LexA family transcriptional regulator | |||
| 22110 | M | M.Sso90ORF15820P (100% identity) | GATC | M.SenC1727ORF22110P |
| 22115 | 330 aa hypothetical protein | |||
| plasmid pSAN1-1727 | ||||
| 24075 | 308 aa hypothetical protein | |||
| 24080 | M | M.SspPIBORF23080P (100% identity) | M.SenC1727ORF24080P | |
| 24085 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18020 | cytochrome ubiquinol oxidase subunit I | |||
| ??? | R | SenNCTR462ORF9180P (100% identity) | CAGAG | SenC1727IIP |
| 18035 | M | M.SenST224ORF2660P (100% identity) | CAGAG | M.SenC1727II |
| 18040 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20495 | 95 aa hypothetical protein | |||
| 20500 | R | SenNCTR462MrrP (100% identity) | SenC1727MrrP | |
| 20505 | type I restriction-modification system | |||