Salmonella enterica subsp. enterica serovar Typhimurium RM9437 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium RM9437 RM systems
Ref: Parker,C.T. et al. unpublished
REBASE ref # 21716
| Sequence length: | GenBank #: | |
| Chromosome: | 4,958,254 bp | CP012985 |
| plasmid pRM9437: | 93,930 bp | CP014577 |
REBASE acronym: Sen9437
Org_num: 18496
All begin SEETMRM9437_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22580 | endoribonuclease SymE | |||
| 22585 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen9437ORF22590P |
| 22590 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen9437ORF22590P |
| 22595 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen9437ORF22590P |
| 22600 | methylated adenine/cytosine restriction protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9980 | amino acid exporter | |||
| 9985 | V | V.StyUK1DcmP (100% identity) | V.Sen9437DcmP | |
| 9990 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen9437DcmP |
| 9995 | hydrolase | |||
| 10190 | Phage-related protein | |||
| 10195 | M | M.StyUK1V (100% identity) | GATC | M.Sen9437ORF10195P |
| 10200 | Primosomal protein | |||
| 13320 | Phage-related protein | |||
| 13325 | M | DNA methyl transferase, phage-associated | GATC | M1.Sen9437ORF13325P |
| 13330 | M | DNA methyl transferase, phage-associated | GATC | M2.Sen9437ORF13325P |
| 13335 | Primosomal protein | |||
| 16960 | DNA-binding protein Fis | |||
| 16965 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen9437ORF16965P |
| 16970 | periplasmic protein | |||
| 17415 | ribulose-phosphate 3-epimerase | |||
| 17420 | M | M.StyTDamP (100% identity) | GATC | M.Sen9437DamP |
| 17425 | membrane protein | |||
| 22430 | sugar/spermidine/putrescine ABC transporter | |||
| 22435 | RM | StyUK1IV (100% identity) | GATCAG | Sen9437ORF22435P |
| 22440 | DNA repair ATPase | |||
| plasmid pRM9437 | ||||
| 23730 | cytoplasmic protein | |||
| 23735 | M | M.StyUK1ORFAP (100% identity) | M.Sen9437ORF23735P | |
| 23740 | cytoplasmic protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2020 | inner membrane protein | |||
| 2025 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen9437ORF2025P |
| 2030 | R | StyUK1IP (100% identity) | CAGAG | Sen9437ORF2025P |
| 2035 | cytoplasmic protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22595 | endonuclease R | |||
| 22600 | R | StyUK1MrrP (100% identity) | Sen9437MrrP | |
| 22605 | inner membrane protein | |||