Haemophilus parasuis SC1401 |
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Putative Haemophilus parasuis SC1401 RM systems
Ref: Dai,K. et al. unpublished
REBASE ref # 22302
Complete sequence: 2,277,540 bp
GenBank #: CP015099
REBASE acronym: Hpa1401
Org_num: 18901
All begin A4U84_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 155 | histidinol-phosphate transaminase | |||
| 160 | R | GpaXP11ORF3145P (98% identity) | Hpa1401ORF175P | |
| 165 | 147 aa hypothetical protein | |||
| 170 | S | S.Hpa318ORF1860P (81% identity) | S.Hpa1401ORF175P | |
| 175 | M | M.Gpa70512ORF5180P (99% identity) | M.Hpa1401ORF175P | |
| 180 | 3-phosphoserine/phosphohydroxythreonine | |||
| 4310 | 325 aa hypothetical protein | |||
| 4315 | R | ApoL55ORF2910P (96% identity) | Hpa1401ORF4315P | |
| 4320 | metal-dependent hydrolase | |||
| 4425 | ATPase | |||
| 4430 | M | M.Sgr2844ORFOP (61% identity) | M.Hpa1401ORF4430P | |
| 4435 | S | S.Bps24701ORF4030P (60% identity) | S.Hpa1401ORF4430P | |
| 4440 | transcriptional regulator | |||
| 5190 | tRNA uridine(34) 5-carboxymethylaminomethyl | |||
| 5195 | S | S.Hpa120103ORFCP (100% identity) | S.Hpa1401ORF5210P | |
| 5200 | R | Gpa1804ORF11620P (99% identity) | Hpa1401ORF5210P | |
| 5205 | 650 aa hypothetical protein | |||
| 5210 | M | M.Hpa120103ORFCP (100% identity) | M.Hpa1401ORF5210P | |
| 5215 | 16S rRNA methyltransferase G | |||
| 6760 | transposase | |||
| 6765 | M | M.GpaHF57ORF9645P (100% identity) | M.Hpa1401ORF6765P | |
| 6770 | anticodon nuclease | |||
| 6775 | S | S2.Hpa12939ORF656P (100% identity) | S1.Hpa1401ORF6765P | |
| 6780 | S | S2.HpaNagORF1802P (99% identity) | S2.Hpa1401ORF6765P | |
| 6785 | 255 aa hypothetical protein | |||
| 6790 | 145 aa hypothetical protein | |||
| 6795 | R | Hpa120103ORFFP (100% identity) | Hpa1401ORF6765P | |
| 6800 | 67 aa hypothetical protein | |||
| 9570 | apolipoprotein N-acyltransferase | |||
| 9575 | R | Hpa120103ORFJP (98% identity) | Hpa1401ORF9595P | |
| 9580 | anticodon nuclease | |||
| 9585 | S | S.Gpa912III (62% identity) | S.Hpa1401ORF9595P | |
| 9590 | CAAX protease | |||
| 9595 | M | M.GpaXP11ORF1280P (99% identity) | M.Hpa1401ORF9595P | |
| 9600 | RNA polymerase sigma factor RpoE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2045 | 3-dehydroquinate synthase | |||
| 2050 | M | M.HpaST41ORF8035P (100% identity) | GATC | M.Hpa1401ORF2050P |
| 2055 | transporter | |||
| 4365 | efflux transporter periplasmic adaptor subunit | |||
| 4370 | S | S.HpaSW140ORF1140P (99% identity) | S.Hpa1401ORF4375P | |
| 4375 | M | M.HpaD74ORF1277P (99% identity) | M.Hpa1401ORF4375P | |
| 4380 | transposase | |||
| 6495 | DNA-binding protein | |||
| 6500 | RM | HpaD74ORF1750P (100% identity) | Hpa1401ORF6500P | |
| 6505 | S | S1.Gpa412ORF11740P (97% identity) | S1.Hpa1401ORF6500P | |
| 6510 | S | S2.GpaHF57ORF960P (97% identity) | S2.Hpa1401ORF6500P | |
| 6515 | cell filamentation protein Fic | |||
| 8855 | aspartate-semialdehyde dehydrogenase | |||
| ??? | M | M.GpaHPS7ORF3655P (62% identity) | M.Hpa1401ORF8860P | |
| 8870 | transposase | |||