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Putative Halorubrum lacusprofundi ATCC 49239 RM systems
Ref: Lucas,S. et al. unpublished
REBASE ref # 22661
Sequence length: | GenBank #: | |
chromosome 1: | 2,735,295 bp | CP001365 (NC_012029) |
chromosome 2: | 525,943 bp | CP001366 (NC_012028) |
plasmid pHLAC01: | 431,338 bp | CP001367 (NC_012030) |
REBASE acronym: Hla49239
Org_num: 3790
All begin Hlac_
Type II | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
chromosome 1 | ||||
1928 | 98 aa hypothetical protein | |||
1929 | M | M.Hsa16337ORFHP (93% identity) | GATC | M.Hla49239ORF1929P |
1930 | UspA domain protein | |||
chromosome 2 | ||||
2760 | 93 aa hypothetical protein | |||
2761 | M | M.HspDL1ORF3670P (99% identity) | AGGCCT | M.Hla49239ORF2761P |
2762 | 178 aa hypothetical protein | |||
2855 | transposase (ISH3) | |||
2856 | RM | HarDL31ORF231P (45% identity) | Hla49239ORF2856P | |
2857 | transposase IS4 family protein | |||
3188 | PglZ domain protein | |||
3189 | RM | HspSJ27ORFDP (61% identity) | Hla49239ORF3189P | |
3190 | transposase | |||
3218 | 105 aa hypothetical protein | |||
3219 | RM | Hli22187ORF11317P (81% identity) | Hla49239ORF3219P | |
3220 | 244 aa hypothetical protein | |||
plasmid pHLAC01 | ||||
3284 | 63 aa conserved hypothetical protein | |||
3285 | RM | Hsp22S1ORFAP (60% identity) | Hla49239ORF3285P | |
3286 | helicase domain protein | |||
3320 | orc1/cdc6 family replication initiation protein | |||
3321 | M | M.HspDM2ORF2764P (94% identity) | GATC | M.Hla49239ORF3321P |
3322 | Mrr family endonuclease | |||
3346 | PglZ domain protein | |||
3347 | M | M.NspAArc1ORF4059P (97% identity) | AGGCCT | M.Hla49239ORF3347P |
3348 | 132 aa conserved hypothetical protein | |||
3348 | 132 aa conserved hypothetical protein | |||
3349 | M | M.NarCCL63ORFIP (94% identity) | M.Hla49239ORF3349P | |
3350 | 358 aa hypothetical protein | |||
3437 | helicase domain protein | |||
3438 | RM | Hla49239ORF3570P (73% identity) | Hla49239ORF3438P | |
3439 | transposase IS4 family protein | |||
3569 | transposase IS4 family protein | |||
3570 | RM | Hla49239ORF3438P (73% identity) | Hla49239ORF3570P | |
3571 | transposase (ISH6) | |||
3601 | 31 aa hypothetical protein | |||
3602 | R | Nve54ORF16560P (70% identity) | CCWGG | Hla49239IP |
3603 | M | M.Nve54ORF16560P (79% identity) | CCWGG | M.Hla49239I |
3604 | transposase , partial | |||
3626 | 319 aa hypothetical protein | |||
3627 | RM | HspYSMS36ORFCP (50% identity) | Hla49239ORF3627P | |
3628 | transposase (ISH3) | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
plasmid pHLAC01 | ||||
3321 | DNA adenine methylase | |||
3322 | R | HspT3MrrP (91% identity) | Hla49239Mrr5P | |
3323 | 340 aa hypothetical protein | |||
3351 | transposase (ISH3) | |||
3352 | R | ATPase associated with various cellular | Hla49239McrBP | |
3353 | 60 aa hypothetical protein |