Pediococcus damnosus TMW 2.1535 |
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Putative Pediococcus damnosus TMW 2.1535 RM systems
Ref: Behr,J. et al. PLoS ONE 11 (3), E0152747 (2016)
REBASE ref # 21709
| Sequence length: | GenBank #: | |
| Chromosome: | 2,247,318 bp | CP012288 |
| plasmid pL21535-3: | 143,870 bp | CP012291 |
| plasmid pL21535-4: | 39,697 bp | CP012292 |
REBASE acronym: Pda1535
Org_num: 18483
All begin ADU72_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 888 | Integrase | |||
| 889 | S | S.Pda1533ORF1803P (100% identity) | S.Pda1535ORF890P | |
| 890 | M | M.Pda1536ORF1406P (100% identity) | M.Pda1535ORF890P | |
| ??? | R | Pda1536ORF1406P (99% identity) | Pda1535ORF890P | |
| 891 | pseudogene | |||
| plasmid pL21535-4 | ||||
| 2326 | 118 aa Hypothetical protein | |||
| 2327 | S | S.Pda1533ORF101P (99% identity) | S.Pda1535ORF2328P | |
| 2328 | M | M.Pda1533ORF101P (99% identity) | M.Pda1535ORF2328P | |
| 2329 | R | Lco3535ORF15025P (98% identity) | Pda1535ORF2328P | |
| 2330 | 172 aa Hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pL21535-3 | ||||
| 62 | transcriptional regulator | |||
| 63 | RM | LplJ50ORF445P (99% identity) | Pda1535ORF63P | |
| 64 | 101 aa Hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 886 | 50 aa Hypothetical protein | |||
| 887 | R | Pda1533MrrP (100% identity) | Pda1535MrrP | |
| 888 | Integrase | |||