Escherichia coli Sanji |
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Putative Escherichia coli Sanji RM systems
Ref: Ho,M. et al. unpublished
REBASE ref # 21704
| Sequence length: | GenBank #: | |
| Chromosome: | 4,891,769 bp | CP011061 |
| plasmid pSJ_255: | 255,368 bp | CP011062 |
| plasmid pSJ_82: | 82,288 bp | CP011065 |
| plasmid pSJ_94: | 94,712 bp | CP011064 |
| plasmid pSJ_98: | 98,436 bp | CP011063 |
REBASE acronym: EcoSan
Org_num: 18472
All begin Y979_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22670 | transposase | |||
| 22675 | R | SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | EcoSanIP |
| 22680 | M | M.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | M.EcoSanI |
| 22685 | S | S.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | S.EcoSanI |
| 22690 | 540 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1625 | 241 aa hypothetical protein | |||
| 1630 | M | M.Eco27ORF20680P (100% identity) | CCWGG | M.EcoSanORF1630P |
| 1635 | R | Eco502CCORF35790P (100% identity) | CCWGG | EcoSanORF1630P |
| 1640 | 326 aa hypothetical protein | |||
| 1645 | integrase | |||
| 1650 | M | M.EcosEC31ORF18555P (100% identity) | GGTACC | M.EcoSanORF1650P |
| 1655 | membrane protein | |||
| 10420 | multidrug DMT transporter | |||
| 10425 | V | V.SsoSE61DcmP (100% identity) | V.EcoSanDcmP | |
| 10430 | DNA cytosine methylase | |||
| 10425 | very short patch repair endonuclease | |||
| 10430 | M | M.SspS13DcmP (100% identity) | CCWGG | M.EcoSanORF10430P |
| 10435 | hydrolase | |||
| 17525 | Fis family transcriptional regulator | |||
| 17530 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoSanORF17530P |
| 17535 | transposase | |||
| 18155 | ribulose-phosphate 3-epimerase | |||
| 18160 | M | M.UbaC1152DamP (100% identity) | M.EcoSanDamP | |
| 18165 | cell division protein DamX | |||
| plasmid pSJ_255 | ||||
| 24810 | nuclease | |||
| 24815 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.EcoSanORF24815P |
| 24820 | 439 aa hypothetical protein | |||
| 25485 | 108 aa hypothetical protein | |||
| 25490 | M | M.YpsF1ORFBP (100% identity) | M.EcoSanORF25490P | |
| 25495 | 202 aa hypothetical protein | |||
| 25595 | DNA-binding protein | |||
| 25600 | M | M.YpsF1ORFDP (100% identity) | M.EcoSanORF25600P | |
| 25605 | 277 aa hypothetical protein | |||
| plasmid pSJ_82 | ||||
| 26850 | recombinase | |||
| 26855 | M | M.Ssop356ORFAP (100% identity) | M.EcoSanORF26855P | |
| 26860 | 73 aa hypothetical protein | |||
| plasmid pSJ_94 | ||||
| 26265 | 103 aa hypothetical protein | |||
| 26270 | M | M.KpnVA569ORF28145P (100% identity) | M.EcoSanORF26270P | |
| 26275 | 73 aa hypothetical protein | |||
| plasmid pSJ_98 | ||||
| 25940 | DNA recombinase | |||
| 25945 | M | M.Ecoppa8ORF25725P (100% identity) | M.EcoSanORF25945P | |
| 25960 | DNA-binding protein | |||