Pirellula species SH-Sr6A |
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Putative Pirellula species SH-Sr6A RM systems
Ref: van der Voort,M. and Raaijmakers,J.M. unpublished
REBASE ref # 21707
Complete sequence: 6,534,136 bp
GenBank #: CP011272
REBASE acronym: PspSr6A
Org_num: 18477
All begin VN12_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6245 | polar chromosome segregation protein | |||
| 6250 | R | PstDORF4442P (93% identity) | PspSr6AORF6255P | |
| 6255 | M | M.PstDORF4442P (91% identity) | M.PspSr6AORF6255P | |
| 6260 | S | S2.Lro220ORF16360P (18% identity) | S.PspSr6AORF6255P | |
| 6265 | 605 aa hypothetical protein | |||
| 8110 | 302 aa hypothetical protein | |||
| 8115 | M | M.PbaMal52ORF27780P (85% identity) | M.PspSr6AORF8115P | |
| 8120 | 425 aa hypothetical protein | |||
| 23460 | 515 aa hypothetical protein | |||
| 23465 | M | M.Uba827746ORFAP (60% identity) | M.PspSr6AORF23465P | |
| 23470 | S | S.Mtu3132II (49% identity) | S.PspSr6AORF23465P | |
| 23475 | 347 aa hypothetical protein | |||
| 23480 | R | GbeBORF3570P (42% identity) | PspSr6AORF23465AP | |
| 23485 | 514 aa hypothetical protein | |||
| 23490 | R | Nar6680ORF297P (26% identity) | PspSr6AORF23465BP | |
| 23495 | 359 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2010 | 493 aa hypothetical protein | |||
| 2015 | M | M.PbaTBK1rORF60630P (75% identity) | M.PspSr6AORF2015P | |
| 2020 | 50 aa hypothetical protein | |||
| 6055 | 140 aa hypothetical protein | |||
| 6060 | M | M.PspSr6AORF24435P (52% identity) | M.PspSr6AORF6060P | |
| 6065 | Integrase core domain protein | |||
| 6130 | 183 aa hypothetical protein | |||
| 6135 | M | M.PspSr6AORF24435P (82% identity) | M.PspSr6AORF6135P | |
| 6140 | 76 aa hypothetical protein | |||
| 6445 | 63 aa hypothetical protein | |||
| 6450 | M | M.PspSr6AORF16635P (68% identity) | M.PspSr6AORF6450P | |
| 6455 | 105 aa hypothetical protein | |||
| 6705 | Xanthan lyase precursor | |||
| 6710 | M | M.PbaK239ORF58000P (43% identity) | M.PspSr6AORF6710P | |
| 6715 | 2-dehydro-3-deoxygluconokinase | |||
| 8205 | 159 aa hypothetical protein | |||
| 8210 | M | M.PspSr6AORF24080P (59% identity) | M.PspSr6AORF8210P | |
| 8215 | DNA-invertase hin | |||
| 8920 | 568 aa hypothetical protein | |||
| 8925 | M | M.Pba31aORF8890P (29% identity) | M.PspSr6AORF8925P | |
| 8930 | 138 aa hypothetical protein | |||
| 16630 | 376 aa hypothetical protein | |||
| 16635 | M | M.PspSr6AORF20730P (92% identity) | M.PspSr6AORF16635P | |
| 16640 | 209 aa hypothetical protein | |||
| 16900 | Alpha-pyrone synthesis polyketide synthase-like | |||
| 16905 | M | M.Sac18658ORFDP (50% identity) | ATGCAT | M.PspSr6AORF16905P |
| 16910 | Twitching mobility protein | |||
| 20725 | 126 aa hypothetical protein | |||
| 20730 | M | M.PspSr6AORF16635P (92% identity) | M.PspSr6AORF20730P | |
| 20735 | 376 aa hypothetical protein | |||
| 24075 | 54 aa hypothetical protein | |||
| 24080 | M | M.PspSr6AORF6135P (86% identity) | M.PspSr6AORF24080P | |
| 24085 | 106 aa hypothetical protein | |||
| 24280 | 600 aa hypothetical protein | |||
| 24285 | M | M2.PspSr6AORF24285P (55% identity) | M1.PspSr6AORF24285P | |
| 24290 | M | M1.PspSr6AORF24285P (55% identity) | M2.PspSr6AORF24285P | |
| 24295 | 197 aa hypothetical protein | |||
| 24430 | 787 aa hypothetical protein | |||
| 24435 | M | M.PspSr6AORF6135P (82% identity) | M.PspSr6AORF24435P | |
| 24440 | 75 aa hypothetical protein | |||
| 26540 | 226 aa hypothetical protein | |||
| 26545 | RM | LbiPORF33P (51% identity) | PspSr6AORF26545P | |
| 26550 | Helix-turn-helix domain protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8455 | AIPR protein | |||
| 8460 | M | M.SspCW117ORF8175P (74% identity) | M.PspSr6AORF8460P | |
| 8465 | R | TimiMBLW1ORF2100P (75% identity) | PspSr6AORF8460P | |
| 8470 | 609 aa hypothetical protein | |||