Gemmata species SH-PL17 |
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Putative Gemmata species SH-PL17 RM systems
Ref: van der Voort,M. and Raaijmakers,J.M. unpublished
REBASE ref # 21707
Complete sequence: 9,045,424 bp
GenBank #: CP011271
REBASE acronym: GspPL17
Org_num: 18476
All begin VT84_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 33715 | 348 aa hypothetical protein | |||
| 33720 | S | S.PbaPan97ORF10660P (29% identity) | S.GspPL17ORF33695P | |
| 33725 | R | BvoTYQ1ORF21285P (67% identity) | GspPL17ORF33695P | |
| 33730 | Blue-light-activated protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7465 | exonuclease V subunit alpha | |||
| 7470 | R | VbaB154ORF4030P (14% identity) | GspPL17ORF7480P | |
| 7475 | 349 aa hypothetical protein | |||
| 7480 | M | M2.AtuKin003ORF555P (57% identity) | GAGCTC | M1.GspPL17ORF7480P |
| 7485 | M | M2.Ado22672ORF1132P (54% identity) | GAGCTC | M2.GspPL17ORF7480P |
| 7495 | Exodeoxyribonuclease III | |||
| 9200 | 235 aa hypothetical protein | |||
| 9205 | M | M.Sam53668ORF3192P (45% identity) | M.GspPL17ORF9205P | |
| 9210 | D12 class N6 adenine-specific DNA | |||
| 9205 | C-5 cytosine-specific DNA methylase | |||
| 9210 | M | M.GspPL17ORF33255P (79% identity) | TGGCCA | M.GspPL17ORF9210P |
| 9215 | Recombination endonuclease VII | |||
| 12250 | 92 aa hypothetical protein | |||
| 12255 | M | M.Gma30ORFMP (94% identity) | M.GspPL17ORF12255P | |
| 12260 | 91 aa hypothetical protein | |||
| 12510 | Serine carboxypeptidase | |||
| 12515 | M | M.Gma30ORFMP (92% identity) | M.GspPL17ORF12515P | |
| 12520 | 91 aa hypothetical protein | |||
| 12695 | 882 aa hypothetical protein | |||
| 12700 | M | M.Gma30ORFLP (95% identity) | M.GspPL17ORF12700P | |
| 12705 | 91 aa hypothetical protein | |||
| 13820 | 107 aa hypothetical protein | |||
| 13825 | M | M.Gma9ORF16960P (49% identity) | M.GspPL17ORF13825P | |
| 13830 | 32 aa hypothetical protein | |||
| 13845 | 107 aa hypothetical protein | |||
| 13850 | M | M.GbaFL17ORF8533P (48% identity) | M.GspPL17ORF13850P | |
| 13855 | 80 aa hypothetical protein | |||
| 18920 | periplasmic serine endoprotease | |||
| 18925 | R | Gma30ORFGP (99% identity) | CCATGG | GspPL17ORF18930P |
| 18930 | M | M.Gma30ORFGP (98% identity) | CCATGG | M.GspPL17ORF18930P |
| 18935 | 111 aa hypothetical protein | |||
| 19565 | 313 aa hypothetical protein | |||
| 19570 | M | M.Gma30ORFFP (99% identity) | M.GspPL17ORF19570P | |
| 19575 | ABC-2 type transporter | |||
| 26510 | 225 aa hypothetical protein | |||
| 26515 | M | M.Gma30ORFPP (100% identity) | M.GspPL17ORF26515P | |
| 26520 | RNA polymerase sigma factor | |||
| 33250 | 129 aa hypothetical protein | |||
| 33255 | M | M.GspPL17ORF9210P (79% identity) | TGGCCA | M.GspPL17ORF33255P |
| 33260 | 176 aa hypothetical protein | |||
| 37705 | 361 aa hypothetical protein | |||
| 37710 | M | M.Gma30ORFAP (83% identity) | M.GspPL17ORF37710P | |
| 37715 | Glycosyl transferase family 2 | |||