Sphingomonas paucimobilis LCT-SP1 |
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Putative Sphingomonas paucimobilis LCT-SP1 RM systems
Ref: Pan,L. et al. Stand Genomic Sci 11, 18 (2016)
REBASE ref # 21465
Contig set: 4,295,943 bp
GenBank #: LDUA00000000 (NZ_LDUA00000000)
REBASE acronym: SpaLCTSP1
Org_num: 18390
All begin ORF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 582 | 101 aa hypothetical protein | |||
| 584 | S | S.SpaKORF28460P (93% identity) | S.SpaLCTSP1ORFDP | |
| 590 | 144 aa hypothetical protein | |||
| 591 | 161 aa hypothetical protein | |||
| 592 | 135 aa hypothetical protein | |||
| 593 | 199 aa hypothetical protein | |||
| 594 | 123 aa hypothetical protein | |||
| 597 | 102 aa hypothetical protein | |||
| 598 | 118 aa hypothetical protein | |||
| 600 | M | M.SpaKORF28460P (90% identity) | M.SpaLCTSP1ORFDP | |
| 603 | 103 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7 | 83 aa hypothetical protein | |||
| ??? | M | M.SpaKORF8250P (70% identity) | AAGCTT | M.SpaLCTSP1ORFHP |
| 18 | 109 aa hypothetical protein | |||
| 50 | 184 aa hypothetical protein | |||
| 52 | H | H.AspSLV7ORF8235P (64% identity) | H.SpaLCTSP1ORFIP | |
| 55 | 183 aa hypothetical protein | |||
| 56 | excinuclease ABC subunit C | |||
| 58 | M | M.SspSph1ORF16855P (100% identity) | GGCGCC | M.SpaLCTSP1ORFIP |
| 62 | R | SspSph1ORF16855P (100% identity) | GGCGCC | SpaLCTSP1ORFIP |
| 66 | V | V.SspSph1ORF16855P (100% identity) | V.SpaLCTSP1ORFIP | |
| 69 | 115 aa hypothetical protein | |||
| 101 | 143 aa hypothetical protein | |||
| 107 | M | M.SpaKORF8030P (88% identity) | YGGCCR | M.SpaLCTSP1ORFGP |
| 112 | 143 aa hypothetical protein | |||
| 382 | 116 aa hypothetical protein | |||
| 385 | R | SspS17ORF3425P (100% identity) | CCWGG | SpaLCTSP1ORFFP |
| ??? | V | V.SspS17ORF3425P (100% identity) | V.SpaLCTSP1ORFFP | |
| 392 | M | M.SspS17ORF3425P (100% identity) | CCWGG | M.SpaLCTSP1ORFFP |
| 395 | 91 aa hypothetical protein | |||
| 959 | 175 aa hypothetical protein | |||
| 962 | M | M.Sfu27551ORF7685P (39% identity) | M.SpaLCTSP1ORFBP | |
| 966 | 107 aa hypothetical protein | |||
| 1173 | 280 aa hypothetical protein | |||
| 1178 | M | M.SspS17ORF4034P (100% identity) | GANTC | M.SpaLCTSP1ORFCP |
| 1181 | 227 aa hypothetical protein | |||
| 1506 | 202 aa hypothetical protein | |||
| 1510 | RM | SspS17ORF2990P (100% identity) | SpaLCTSP1ORFAP | |
| 1524 | peptidase S10 | |||