Geobacter species FRC-32 |
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Putative Geobacter species FRC-32 RM systems
Ref: Lucas,S. et al. unpublished
REBASE ref # 10906
| Sequence length: | GenBank #: | |
| Chromosome: | 4,304,501 bp | CP001390 (NC_011979) |
| Chromosome: | 3,982,463 bp | AASH00000000 (NZ_AASH00000000) |
REBASE acronym: GspFRC
Org_num: 5293
All begin Geob_, GeobDRAFT_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2866 | 574 aa hypothetical protein | |||
| 2867 | S | S.PaeM8A4ORF17915P (50% identity) | S.GspFRCORF2868P | |
| 2868 | M | M.Kcr185ORF5455P (77% identity) | M.GspFRCORF2868P | |
| 2869 | R | Afe6S08ORF4395P (84% identity) | GspFRCORF2868P | |
| 2870 | DNA topoisomerase type IA zn finger domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 582 | endonuclease Nuc | |||
| 583 | M | M.GspFRCORF2872P (100% identity) | CCCGGG | M.GspFRCORF583P |
| 584 | R | GspFRCORF2872P (100% identity) | CCCGGG | GspFRCORF583P |
| 585 | helix-turn-helix transcriptional regulator, XRE | |||
| 708 | endonuclease Nuc | |||
| 709 | V | V.OspA1ORF4070P (58% identity) | V.GspFRCORF711P | |
| 710 | R | R1.Msp49242ORFAP (54% identity) | GGCGCC | GspFRCORF711P |
| 711 | M | M.Hba7MK25ORFDP (49% identity) | GGCGCC | M.GspFRCORF711P |
| 712 | competence protein CoiA-related protein | |||
| Chromosome | ||||
| 2983 | Helix-turn-helix motif | |||
| 2984 | R | GspFRCORF583P (100% identity) | CCCGGG | GspFRCORF2872P |
| 2872 | M | M.GspFRCORF583P (100% identity) | CCCGGG | M.GspFRCORF2872P |
| 2873 | phospholipase D/transphosphatidylase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2869 | restriction endonuclease, putative | |||
| 2870 | R | AhyAYN7Mrr2P (29% identity) | GspFRCMrrP | |
| 2871 | protein of unknown function DUF1814 | |||