Chloracidobacterium thermophilum OC1 |
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Putative Chloracidobacterium thermophilum OC1 RM systems
Ref: Hallenbeck,P.C. et al. Genome Announc 4 (1), e01570-15 (2016)
REBASE ref # 21392
Contig set: 3,600,358 bp
GenBank #: LMXM00000000 (NZ_LMXM00000000)
REBASE acronym: CthOC1
Org_num: 18440
All begin ORF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 510 | HTH domain-containing protein, XRE family | |||
| 513 | M | M.OcyMTP1ORFAP (100% identity) | M.CthOC1ORFRP | |
| 519 | S | S2.OcyMTP1ORFAP (100% identity) | S1.CthOC1ORFRP | |
| 524 | S | S1.OcyMTP1ORFAP (100% identity) | S2.CthOC1ORFRP | |
| 526 | 127 aa hypothetical protein | |||
| 527 | 107 aa hypothetical protein | |||
| 528 | R | OcyMTP1ORFAP (100% identity) | CthOC1ORFRP | |
| 534 | 371 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1 | M | M.OcyMTP1ORFIP (38% identity) | M.CthOC1ORFOP | |
| 2 | 59 aa hypothetical protein | |||
| 1 | 89 aa hypothetical protein | |||
| 3 | R | OcyMTP1ORFIP (100% identity) | GTMKAC | CthOC1ORFKP |
| 5 | 194 aa hypothetical protein | |||
| 150 | ABC transporter ATP-binding protein | |||
| 153 | M | M.Csp4045ORF1995P (95% identity) | M.CthOC1ORFSP | |
| 157 | 202 aa hypothetical protein | |||
| 140 | 154 aa hypothetical protein | |||
| 141 | RM | OcyMTP1ORFUP (100% identity) | CthOC1ORFXP | |
| 147 | 89 aa hypothetical protein | |||
| 154 | 134 aa hypothetical protein | |||
| 157 | M | M.OcyMTP1ORFLP (100% identity) | GACNNNGTC | M.CthOC1ORFFP |
| 159 | 308 aa hypothetical protein | |||
| 198 | 133 aa hypothetical protein | |||
| 200 | M | M.OcyMTP1ORFHP (100% identity) | M.CthOC1ORFJP | |
| 205 | 63 aa hypothetical protein | |||
| 377 | 145 aa hypothetical protein | |||
| 382 | M | M.CspsBORF14025P (31% identity) | CGATCG | M.CthOC1ORFVP |
| 386 | 80 aa hypothetical protein | |||
| 493 | 119 aa hypothetical protein | |||
| 494 | R | OcyMTP1ORFBP (100% identity) | CCSGG | CthOC1ORFQP |
| 497 | M | M.OcyMTP1ORFBP (100% identity) | CCSGG | M.CthOC1ORFQP |
| 502 | 130 aa hypothetical protein | |||
| 548 | 72 aa hypothetical protein | |||
| 550 | M | M.OcyMTP1ORFSP (100% identity) | CAGCTG | M.CthOC1ORFUP |
| 555 | 116 aa hypothetical protein | |||
| 577 | 248 aa hypothetical protein | |||
| 578 | R | OcyMTP1ORFJP (100% identity) | TCTAGA | CthOC1ORFNP |
| 581 | M | M.OcyMTP1ORFJP (100% identity) | TCTAGA | M.CthOC1ORFNP |
| 584 | 201 aa hypothetical protein | |||
| 570 | 316 aa hypothetical protein | |||
| 573 | R | OcyMTP1ORFCP (100% identity) | CthOC1ORFPP | |
| 575 | M | M.OcyMTP1ORFCP (100% identity) | M.CthOC1ORFPP | |
| 580 | HEAT repeat-containing protein | |||
| 605 | 473 aa hypothetical protein | |||
| 608 | M | M.OcyMTP1ORFTP (100% identity) | TTAA | M.CthOC1ORFTP |
| 613 | 72 aa hypothetical protein | |||
| 865 | 182 aa hypothetical protein | |||
| 869 | M | M.OcyMTP1ORFKP (100% identity) | M.CthOC1ORFMP | |
| 886 | 65 aa hypothetical protein | |||
| 965 | 114 aa hypothetical protein | |||
| 968 | RM | OcyMTP1ORFMP (100% identity) | CthOC1ORFEP | |
| 989 | helicase | |||
| 994 | 76 aa hypothetical protein | |||
| 995 | M | M.OcyMTP1ORFGP (100% identity) | GGCC | M.CthOC1ORFIP |
| 997 | 122 aa hypothetical protein | |||
| 1168 | 143 aa hypothetical protein | |||
| 1170 | C | C.OcyMTP1ORFDP (100% identity) | C.CthOC1ORFLP | |
| 1172 | R | OcyMTP1ORFDP (100% identity) | TCCGGA | CthOC1ORFLP |
| 1175 | M | M.OcyMTP1ORFDP (100% identity) | TCGCGA | M.CthOC1ORFLP |
| 1177 | 72 aa hypothetical protein | |||
| 1257 | glyoxalase | |||
| 1261 | R | OcyMTP1ORFPP (100% identity) | RGATCY | CthOC1ORFBP |
| 1263 | M | M.OcyMTP1ORFPP (100% identity) | RGATCY | M.CthOC1ORFBP |
| 1265 | 116 aa hypothetical protein | |||
| 1274 | 77 aa hypothetical protein | |||
| 1275 | M | M.OcyMTP1ORFOP (100% identity) | GGCC | M.CthOC1ORFCP |
| 1276 | DNA ligase ) LigA | |||
| 1861 | 515 aa hypothetical protein | |||
| 1869 | M | M.OcyMTP1ORFEP (100% identity) | AATT | M.CthOC1ORFGP |
| 1870 | adenine-specific DNA methylase | |||
| 1869 | Adenine-specific DNA methylase | |||
| 1870 | M | M.OcyMTP1ORFFP (100% identity) | CATG | M.CthOC1ORFHP |
| 1873 | 176 aa hypothetical protein | |||
| 2390 | 119 aa hypothetical protein | |||
| 2391 | M | M.OcyMTP1ORFQP (100% identity) | GATC | M.CthOC1ORFAP |
| 2395 | 155 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 212 | 132 aa hypothetical protein | |||
| 215 | M | M.OcyMTP1ORFRP (100% identity) | M.CthOC1ORFWP | |
| 222 | 82 aa hypothetical protein | |||
| 223 | 93 aa hypothetical protein | |||
| 224 | 70 aa hypothetical protein | |||
| 225 | 94 aa hypothetical protein | |||
| 226 | 98 aa hypothetical protein | |||
| 227 | 101 aa hypothetical protein | |||
| 228 | 176 aa hypothetical protein | |||
| 229 | nucleotidyltransferase | |||
| 230 | 120 aa hypothetical protein | |||
| 232 | 61 aa hypothetical protein | |||
| 233 | R | OcyMTP1ORFRP (100% identity) | CthOC1ORFWP | |
| 238 | 85 aa hypothetical protein | |||
| 925 | 206 aa hypothetical protein | |||
| 928 | R | OcyMTP1ORFNP (100% identity) | CthOC1ORFDP | |
| 933 | 212 aa hypothetical protein | |||
| 934 | 110 aa hypothetical protein | |||
| 935 | 102 aa hypothetical protein | |||
| 936 | 72 aa hypothetical protein | |||
| 937 | M | M.OcyMTP1ORFNP (100% identity) | M.CthOC1ORFDP | |
| 942 | 153 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1388 | 110 aa hypothetical protein | |||
| 1390 | R | OcyMTP1MrrP (100% identity) | CthOC1MrrP | |
| 1391 | 93 aa hypothetical protein | |||