Veillonella parvula SHI-1 |
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Putative Veillonella parvula SHI-1 RM systems
Ref: Edlund,A. et al. Genome Announc 4 (1), e01684-15 (2016)
REBASE ref # 21388
Contig set: 1,067,525 bp
GenBank #: LOJO00000000 (NZ_LOJO00000000)
REBASE acronym: VpaSHI1
Org_num: 18463
All begin AT982_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1945 | 109 aa hypothetical protein | |||
| 1950 | M | M.Vpa10ORF6920P (97% identity) | M.VpaSHI1ORF1950P | |
| 1955 | 110 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 950 | DNA mismatch repair protein MutT | |||
| 955 | R | Vpa10ORF5915P (100% identity) | VpaSHI1ORF955P | |
| 960 | 309 aa hypothetical protein | |||
| 2780 | DNA gyrase subunit A | |||
| 2785 | R | Vpa10McrC2P (100% identity) | VpaSHI1McrCP | |
| 2790 | R | Vpa10McrB2P (100% identity) | VpaSHI1McrBP | |
| 2795 | pseudogene | |||