Clostridium cellulolyticum H10 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Clostridium cellulolyticum H10 RM systems
Ref: Lucas,S. et al. unpublished
REBASE ref # 12259
| Sequence length: | GenBank #: | |
| Chromosome: | 4,068,724 bp | CP001348 (NC_011898) |
| Chromosome: | 3,958,683 bp | AAVC00000000 (NZ_AAVC00000000) |
REBASE acronym: Cce
Org_num: 3116
All begin Ccel_, CcelDRAFT_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1918 | Recombinase | |||
| ??? | R | DhaORFC140P (76% identity) | CceORF2725P | |
| 1920 | M | M.MspHf6ORF14260P (88% identity) | M.CceORF2725P | |
| 1921 | S | S.EfaQU50ORF90P (64% identity) | S2.CceORF2725P | |
| 1922 | phage integrase | |||
| 1923 | S | S2.CceORF2725P (59% identity) | S1.CceORF2725P | |
| 1924 | 241 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 833 | 57 aa hypothetical protein | |||
| 834 | M | M.CpaC7ORF19670P (93% identity) | M.CceORF834P | |
| 835 | 257 aa hypothetical protein | |||
| 2548 | Peptidase M23 | |||
| 2549 | M | M1.Cma2767ORF26350P (87% identity) | GCGC | M.CceORF2549P |
| 2550 | 84 aa hypothetical protein | |||
| 2551 | Integrase catalytic region | |||
| 2552 | R | Cma2767ORF26350P (32% identity) | GCGC | CceORF2549BP |
| 2553 | Integrase catalytic region | |||
| 2554 | R | M2.Cli100320ORF1870P (16% identity) | GCGC | CceORF2549AP |
| 2555 | 48 aa hypothetical protein | |||
| 2761 | 546 aa hypothetical protein | |||
| ??? | M | M.Rpa2782ORF19290P (76% identity) | M.CceORF2762P | |
| 2763 | uncharacterized protein | |||
| 2786 | 139 aa conserved hypothetical protein | |||
| 2787 | M | M.Rpa2782ORF19395P (89% identity) | M.CceORF2787P | |
| 2788 | 65 aa conserved hypothetical protein | |||
| 2840 | 230 aa conserved hypothetical protein | |||
| 2841 | M | M.Cor28571ORF1740P (98% identity) | M.CceORF2841P | |
| 2842 | DNA methylase N-4/N-6 domain protein | |||
| 2841 | DNA-cytosine methyltransferase | |||
| 2842 | M | M.LspG01HORF20475P (99% identity) | M.CceORF2842P | |
| 2843 | S-adenosylmethionine synthetase | |||
| 2864 | 622 aa conserved hypothetical protein | |||
| 2865 | C | C.RspMA18ORF16400P (100% identity) | C.CceIP | |
| 2866 | R | CklORF2671P (99% identity) | CCGG | CceI |
| 2867 | M | M.RspMA18ORF16400P (100% identity) | CCGG | M.CceI |
| 2868 | RNA methyltransferase, TrmA family | |||
| 3058 | 138 aa hypothetical protein | |||
| ??? | M | M.Vpa13ORFCP (34% identity) | M.CceORF3059P | |
| 3061 | 49 aa hypothetical protein | |||
| Chromosome | ||||
| 3194 | 318 aa hypothetical protein | |||
| 3195 | M | M.Bbr544ORF18585P (40% identity) | CCCGGG | M.CceORF3152P |
| 3196 | TRAG protein | |||