Methanosphaerula palustris E1-9c |
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Putative Methanosphaerula palustris E1-9c RM systems
Ref: Lucas,S. et al. unpublished
REBASE ref # 20998
Complete sequence: 2,922,917 bp
GenBank #: CP001338 (NC_011832)
REBASE acronym: MpaE
Org_num: 5278
All begin Mpal_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 899 | 212 aa conserved hypothetical protein | |||
| 900 | S | S.Mso21ORFIP (35% identity) | S.MpaEORF901P | |
| 901 | M | M.Mbo6A8ORF1031P (86% identity) | M.MpaEORF901P | |
| 902 | R | Mbo6A8ORF1031P (84% identity) | MpaEORF901P | |
| 903 | 36 aa hypothetical protein | |||
| 1091 | protein of unknown function DUF45 | |||
| 1092 | R | TspPB12ORF2800P (57% identity) | MpaEORF1097P | |
| 1093 | restriction endonuclease | |||
| ??? | S | S.Tsp9NORFGP (34% identity) | S.MpaEORF1097P | |
| 1096 | 597 aa hypothetical protein | |||
| 1097 | M | M.MspKEPCO1ORF9160P (67% identity) | M.MpaEORF1097P | |
| 1098 | 54 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3 | aminotransferase class I and II | |||
| 4 | M | M.MseS3FaORF4960P (49% identity) | CTNAG | M.MpaEORF4P |
| 5 | Methyltransferase type 11 | |||
| 702 | 520 aa hypothetical protein | |||
| 703 | M | M.MboBA1ORF393P (53% identity) | GATC | M.MpaEORF703P |
| 704 | SufBD protein | |||
| 924 | major facilitator superfamily MFS_1 | |||
| 925 | M | M.MmaDAL1ORF1730P (51% identity) | M.MpaEORF925P | |
| 926 | 305 aa conserved hypothetical protein | |||
| 992 | HAD-superfamily hydrolase, subfamily IA, variant | |||
| 993 | RM | 826 aa hypothetical protein | MpaEORF993P | |
| 994 | PAS/PAC sensor signal transduction histidine | |||
| 1366 | 34 aa hypothetical protein | |||
| 1367 | M | M.Mbo6A8DndBP (62% identity) | M.MpaEDndBP | |
| 1368 | sulfurtransferase DndC | |||
| 1367 | DNA sulfur modification protein DndB | |||
| 1368 | M | M.Mbo6A8DndCP (78% identity) | M.MpaEDndCP | |
| 1369 | DNA sulfur modification protein DndD | |||
| 1368 | sulfurtransferase DndC | |||
| 1369 | M | M.Mbo6A8DndDP (64% identity) | M.MpaEDndDP | |
| 1370 | DNA sulfur modification protein DndE | |||
| 1369 | DNA sulfur modification protein DndD | |||
| 1370 | M | M.Mbo6A8DndEP (77% identity) | M.MpaEDndEP | |
| 1371 | aminotransferase class V | |||
| 1370 | DNA sulfur modification protein DndE | |||
| 1371 | M | M.Mbo6A8DndAP (83% identity) | M.MpaEDndAP | |
| 1372 | protein of unknown function DUF262 | |||
| 2730 | amidohydrolase | |||
| 2731 | M | M.Mbo6A8ORF2206P (60% identity) | GTAC | M.MpaEORF2731P |
| 2732 | HEAT domain containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1092 | type I site-specific deoxyribonuclease, HsdR | |||
| 1093 | R | Ama55MrrP (33% identity) | MpaEMrrP | |
| 1094 | restriction modification system DNA specificity | |||
| 1608 | CRISPR-associated helicase Cas3 | |||
| 1609 | R | Mth2373MrrP (52% identity) | MpaEMrr2P | |
| 1610 | 49 aa hypothetical protein | |||