Ref: Valdes,J. et al. unpublished

REBASE ref # 10859

Complete sequence: 2,982,397 bp

GenBank #: CP001219 (NC_011761)

REBASE acronym: AfeA

Org_num: 5262

 

All begin AFE_

Type I
ORF Gene Most similar Specificity Name
 
682 35 aa hypothetical protein
683 R AfeBORF833P (1% identity) AfeAORF684P
684 M M.AfeBORF833P (1% identity) M.AfeAORF684P
685 death-on-curing family protein
686 S S.Asp221ORFSP (0% identity) S.AfeAORF684BP
687 519 aa hypothetical protein
 
825 49 aa hypothetical protein
826 M M.AfeBORF964P (1% identity) M.AfeAORF826P
827 ATP-dependent DNA helicase, putative
828 355 aa conserved hypothetical protein
829 S S.AfeBORF964P (0% identity) S.AfeAORF826P
831 182 aa hypothetical protein
 
840 937 aa hypothetical protein
841 R AfeBORF964P (1% identity) AfeAORF841P
842 111 aa conserved hypothetical protein
 
1384 113 aa conserved hypothetical protein
??? M M.AfeAORF1385P (0% identity) M.AfeAORF1P
1386 74 aa hypothetical protein
 
1384 113 aa conserved hypothetical protein
1385 M M.AfeAORF2793P (0% identity) M.AfeAORF1385P
1386 74 aa hypothetical protein
 
1574 327 aa hypothetical protein
1575 R AfeBORF228P (0% identity) AfeAORF1577P
1576 S S.Asp221ORFVP (0% identity) S.AfeAORF1577P
1577 M M.AthA01ORFEP (0% identity) M.AfeAORF1577P
1578 PIN domain protein
 
2371 79 aa hypothetical protein
2372 M M.AfeBORF2003P (1% identity) M.AfeAORF2372P
2373 67 aa hypothetical protein
2374 anticodon nuclease, putative
2376 53 aa hypothetical protein
2375 ATP-dependent helicase, DEAD/DEAH box family
2377 262 aa hypothetical protein
??? S S.AfeBORF2003P (1% identity) S.AfeAORF2372P
2379 65 aa hypothetical protein
2380 conserved domain protein
2381 R AfeBORF2003P (1% identity) AfeAORF2372P
2382 45 aa hypothetical protein
 
2789 260 aa hypothetical protein
2790 R AfeBORF2418P (1% identity) AfeAORF2793P
2791 S S.AfeBORF2418P (1% identity) S.AfeAORF2793P
2792 73 aa conserved hypothetical protein
2793 M M.AfeBORF2418P (1% identity) M.AfeAORF2793P
2794 140 aa hypothetical protein
Type II
ORF Gene Most similar Specificity Name
 
1220 261 aa hypothetical protein
1221 M M.Afe5721ORF10651P (0% identity) M.AfeAORF1221P
1222 237 aa hypothetical protein
 
1567 398 aa hypothetical protein
1568 M M.Asp221ORFPP (1% identity) TGGCCA M.AfeAORF1568P
1569 single-strand binding protein
Type III
ORF Gene Most similar Specificity Name
 
3190 43 aa hypothetical protein
3191 R AfeBORF2793P (1% identity) AfeAORF3192P
3192 M M.AfeBORF2793P (1% identity) M.AfeAORF3192P
3193 PHP domain protein
Type IV
ORF Gene Most similar Specificity Name
 
2768 transposase, degenerate
2769 R AfeBMrrP (0% identity) AfeAMrr2P
2770 pseudogene
 
3185 ISPsy2, transposase
3186 R AfeBMrr2P (1% identity) AfeAMrrP
3187 transposase. degenerate