Vibrio harveyi ATCC 43516 |
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Putative Vibrio harveyi ATCC 43516 RM systems
Ref: Hoffmann,M. et al. unpublished
REBASE ref # 21329
| Sequence length: | GenBank #: | |
| chromosome 1: | 3,718,359 bp | CP014038 |
| chromosome 2: | 2,320,570 bp | CP014039 |
REBASE acronym: Vha43516
Org_num: 18096
All begin AL538_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 13965 | restriction endonuclease | |||
| 13970 | R | VpoC121ORF3445P (93% identity) | CGAYNNNNNGGT | Vha43516IIIP |
| 13975 | S | S.Vsp16ORF2545P (45% identity) | CGAYNNNNNGGT | S.Vha43516III |
| 13980 | M | M.Asp194ORFAP (86% identity) | CGAYNNNNNGGT | M.Vha43516III |
| 13985 | 301 aa hypothetical protein | |||
| chromosome 2 | ||||
| 21525 | 140 aa hypothetical protein | |||
| 21530 | R | VspV1BORF5180P (99% identity) | GAGNNNNNCTTC | Vha43516IP |
| 21535 | M | M.VspV1BORF5180P (98% identity) | GAGNNNNNCTTC | M.Vha43516I |
| 21540 | S | S.Eco13107ORF10P (60% identity) | GAGNNNNNCTTC | S.Vha43516I |
| 21545 | 1332 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 3585 | 423 aa hypothetical protein | |||
| 3590 | R | Vha1709ORF132P (99% identity) | GGCC | Vha43516ORF3590P |
| 3595 | macrolide ABC transporter ATP-binding protein | |||
| 7740 | ribulose-phosphate 3-epimerase | |||
| 7745 | M | M.Vsp43155DamP (100% identity) | GATC | M.Vha43516DamP |
| 7750 | cell division protein DamX | |||
| 8895 | 155 aa hypothetical protein | |||
| 8900 | M | M.Vhaf7ORFCP (82% identity) | GGWCC | M.Vha43516ORF8900P |
| 8905 | R | Vhaf7ORFCP (81% identity) | Vha43516ORF8900P | |
| 8910 | DUF3581 domain-containing protein | |||
| 12615 | 158 aa hypothetical protein | |||
| 12620 | M | M.VpaBM17AORF2980P (39% identity) | GATC | M.Vha43516ORF12620P |
| 12625 | DNA-binding protein | |||
| 12645 | BREX system P-loop protein BrxC | |||
| 12650 | RM | Adh62ORF27810P (88% identity) | GCYYGAC | Vha43516II |
| 12655 | DUF262 domain-containing protein | |||
| 13905 | NupC/NupG family nucleoside CNT transporter | |||
| ??? | M | M.Vhafi2ORFAP (100% identity) | GGCC | M.Vha43516ORF13910P |
| 13915 | 441 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 13960 | 200 aa hypothetical protein | |||
| 13965 | R | Vco58MrrP (75% identity) | Vha43516MrrP | |
| 13970 | deoxyribonuclease HsdR | |||