Geobacter soli GSS01 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Geobacter soli GSS01 RM systems
Ref: Yang,G. et al. Stand Genomic Sci 10, 118 (2015)
REBASE ref # 21097
Contig set: 3,657,100 bp
GenBank #: JXBL00000000 (NZ_JXBL00000000)
REBASE acronym: Gsp01
Org_num: 17990
All begin SE37_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 15540 | 148 aa hypothetical protein | |||
| 15545 | M | M.GanSD1ORF1090P (87% identity) | M.Gsp01ORF15545P | |
| 15550 | S | S.PmeBin247ORFGP (29% identity) | S.Gsp01ORF15545P | |
| 15555 | R | GanSD1ORF1090P (92% identity) | Gsp01ORF15545P | |
| 15560 | 114 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4115 | transcriptional regulator | |||
| 4120 | M | M.SfuMORF3845P (98% identity) | GTCGAC | M.Gsp01ORF4120P |
| 4125 | helicase | |||
| 4130 | 1439 aa hypothetical protein | |||
| 4135 | helicase | |||
| 4140 | 227 aa hypothetical protein | |||
| 4145 | helicase | |||
| 4150 | sulfate ABC transporter substrate-binding | |||
| 4155 | phospholipase | |||
| 4160 | R | SfuMORF3853P (98% identity) | GTCGAC | Gsp01ORF4120P |
| 4165 | V | V.SfuMORF3853P (75% identity) | V.Gsp01ORF4120P | |
| 4170 | 3-ketoacyl-ACP reductase | |||
| 4125 | helicase | |||
| 4130 | RM | DvuL2ORF4075P (64% identity) | Gsp01ORF4130P | |
| 4135 | helicase | |||
| 6230 | 281 aa hypothetical protein | |||
| ??? | V | V.Dol6ORF3195P (80% identity) | V.Gsp01ORF6250P | |
| 6235 | 192 aa hypothetical protein | |||
| 6240 | 551 aa hypothetical protein | |||
| 6245 | 246 aa hypothetical protein | |||
| 6250 | M | M.Dol6ORF3195P (91% identity) | M.Gsp01ORF6250P | |
| 6255 | transcriptional regulator | |||
| 6490 | 120 aa hypothetical protein | |||
| 6495 | M | M.MspC1S70ORF4030P (98% identity) | GGATC | M.Gsp01ORF6495P |
| 6500 | 117 aa hypothetical protein | |||
| 15325 | lactate permease | |||
| 15330 | M | M.GanSD1ORF865P (100% identity) | M.Gsp01ORF15330P | |
| 15335 | peptidylprolyl isomerase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7435 | 170 aa hypothetical protein | |||
| 7440 | R | PprDORF237P (87% identity) | Gsp01ORF7445P | |
| 7445 | M | M.MspFAM1ORFBP (66% identity) | M.Gsp01ORF7445P | |
| 7450 | 252 aa hypothetical protein | |||