Cyanothece species PCC 7424 |
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Putative Cyanothece species PCC 7424 RM systems
Ref: Lucas,S. et al. unpublished
REBASE ref # 10856
| Sequence length: | GenBank #: | |
| Chromosome: | 5,942,652 bp | CP001291 (NC_011729) |
| plasmid pP742402: | 197,705 bp | CP001293 (NC_011737) |
REBASE acronym: Csp7424
Org_num: 5258
All begin PCC7424_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 971 | transcriptional regulator, MerR family | |||
| 972 | M | M.Gth3921I (57% identity) | M.Csp7424ORF972P | |
| 973 | S | Efa1981ORF9125P (12% identity) | S.Csp7424ORF972P | |
| 974 | 241 aa hypothetical protein | |||
| 2085 | N-6 DNA methylase | |||
| 2086 | S | S.Bth9NORF720P (19% identity) | S.Csp7424ORF2087P | |
| 2087 | M | M.Csp7822ORF4712P (53% identity) | M.Csp7424ORF2087P | |
| 2088 | R | Csp8801ORF2989P (55% identity) | Csp7424ORF2087P | |
| 2089 | Peptidase M23 | |||
| 3909 | 125 aa conserved hypothetical protein | |||
| 3910 | M | M.PspRG53ORF2319P (38% identity) | M.Csp7424ORF3910P | |
| 3911 | transposase ISAs1 family protein | |||
| 4138 | transposase | |||
| 4139 | S | S.PbaE1PORF19790P (33% identity) | S.Csp7424ORF4142P | |
| 4140 | 77 aa hypothetical protein | |||
| 4141 | 75 aa conserved hypothetical protein | |||
| 4142 | M | M.Mpa1757I (83% identity) | M.Csp7424ORF4142P | |
| 4143 | 65 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1107 | lipoic acid synthetase | |||
| 1108 | M | M.NspNUC1ORF6504P (76% identity) | M.Csp7424ORF1108P | |
| 1109 | 53 aa hypothetical protein | |||
| 1832 | protein of unknown function DUF820 | |||
| 1833 | M | M.Osp6506ORF410004P (28% identity) | CCATGG | M.Csp7424ORF1833P |
| 1834 | R | UprJFFORF21P (50% identity) | Csp7424ORF1833P | |
| 1835 | phosphoenolpyruvate synthase | |||
| 2027 | 161 aa conserved hypothetical protein | |||
| 2028 | M | M.Csp7822ORF2876P (73% identity) | GGCC | M.Csp7424ORF2028P |
| 2029 | protein of unknown function DUF820 | |||
| 2256 | ABC-1 domain protein | |||
| 2257 | M | M.Csp7822ORF418P (82% identity) | GCSGC | M.Csp7424ORF2257P |
| 2258 | peptidase U61 LD-carboxypeptidase A | |||
| 2694 | 353 aa conserved hypothetical protein | |||
| 2695 | M | M.Csp7822ORF247P (76% identity) | RGCGCY | M.Csp7424ORF2695P |
| 2696 | agmatinase | |||
| 2705 | DNA binding domain protein, excisionase family | |||
| 2706 | M | M.Nsp7524ORF1537P (77% identity) | GGTNACC | M.Csp7424ORF2706P |
| 2707 | R | Nsp7524ORF1537P (82% identity) | GGTNACC | Csp7424ORF2706P |
| 2708 | 173 aa conserved hypothetical protein | |||
| 3011 | FHA modulated glycosyl | |||
| 3012 | M | M.PamM71ORF9345P (77% identity) | CYCGRG | M.Csp7424ORF3012P |
| 3013 | R | PamM71ORF9345P (78% identity) | CYCGRG | Csp7424ORF3012P |
| 3014 | 160 aa hypothetical protein | |||
| 3050 | hopene-associated glycosyltransferase HpnB | |||
| 3051 | M | M.KstMBR1ORF6P (64% identity) | M.Csp7424ORF3051P | |
| 3052 | 324 aa hypothetical protein | |||
| 3259 | 123 aa hypothetical protein | |||
| 3260 | M | modification methylase NspV | TTCGAA | M.Csp7424ORF3260P |
| 3261 | photosystem II core protein PsbZ | |||
| 3529 | 5-oxoprolinase (ATP-hydrolyzing) | |||
| ??? | R | 162 aa hypothetical protein Nos7524_3148 | ATGCAT | Csp7424ORF3531P |
| 3531 | M | M.Nsp7524ORF3147P (75% identity) | ATGCAT | M.Csp7424ORF3531P |
| 3532 | Glutathione S-transferase domain protein | |||
| 3998 | 528 aa hypothetical protein | |||
| 3999 | M | M.Fsp1846ORFGP (50% identity) | GTMKAC | M.Csp7424ORF3999P |
| 4000 | SAM-dependent methyltransferase | |||
| 4005 | 125 aa conserved hypothetical protein | |||
| 4006 | M | M.Csp7822ORF992P (65% identity) | GATC | M.Csp7424ORF4006P |
| 4007 | dihydropteroate synthase | |||
| 4156 | Acireductone dioxygenase ARD | |||
| 4157 | M | M.Psp001ORF9080P (56% identity) | M.Csp7424ORF4157P | |
| 4158 | metallophosphoesterase | |||
| 4167 | NADH dehydrogenase (ubiquinone) 24 kDa subunit | |||
| 4168 | R | LinBM01ORF5260P (69% identity) | CGTACG | Csp7424ORF4169P |
| 4169 | M | M.CagORF2240P (60% identity) | CGTACG | M.Csp7424ORF4169P |
| 4170 | transcriptional acitvator, Baf family | |||
| 4191 | undecaprenol kinase | |||
| 4192 | M | M.Csp7822ORF809P (80% identity) | CCGG | M.Csp7424ORF4192P |
| 4193 | 471 aa conserved hypothetical protein | |||
| 4261 | 185 aa hypothetical protein | |||
| 4262 | M | M.Nsp926ORF17650P (63% identity) | CGATCG | M.Csp7424ORF4262P |
| 4263 | pseudogene | |||
| 4303 | protein of unknown function DUF820 | |||
| 4304 | M | M.Ocy1ORF2400P (69% identity) | CAGCTG | M.Csp7424ORF4304P |
| 4305 | 310 aa conserved hypothetical protein | |||
| 4449 | MscS Mechanosensitive ion channel | |||
| 4450 | M | M.Asp90ORF12329P (74% identity) | AGTACT | M.Csp7424ORF4450P |
| 4451 | R | Pag976ORF3278P (13% identity) | AGTACT | Csp7424ORF4450P |
| 4452 | Acetylornithine transaminase | |||
| 4786 | pentapeptide repeat protein | |||
| 4787 | M | M.Sto24ORF5490P (69% identity) | ACRYGT | M.Csp7424ORF4787P |
| 4788 | R | Osp6506ORF3730015P (76% identity) | ACRYGT | Csp7424ORF4787P |
| 4789 | 84 aa conserved hypothetical protein | |||
| 4961 | Spermine synthase | |||
| 4962 | M | M.Csp7507ORF613P (59% identity) | CTGCAG | M.Csp7424ORF4962P |
| 4963 | R | LfuKN01ORF1940P (22% identity) | CTGCAG | Csp7424ORF4962P |
| 4964 | 133 aa conserved hypothetical protein | |||
| 4973 | lipoprotein signal peptidase | |||
| 4974 | M | M.Csp7822ORF353P (41% identity) | CAGCTG | M.Csp7424ORF4974P |
| 4975 | 59 aa hypothetical protein | |||
| 5154 | acetylornithine and succinylornithine | |||
| 5155 | R | Hsp220ORF26800P (91% identity) | CCTNAGG | Csp7424ORF5156P |
| 5156 | M | M.Cbr22ORF9340P (72% identity) | CCTNAGG | M.Csp7424ORF5156P |
| 5157 | 247 aa conserved hypothetical protein | |||
| plasmid pP742402 | ||||
| 5430 | 286 aa conserved hypothetical protein | |||
| 5431 | M | M.Csp7822ORF6833P (37% identity) | M.Csp7424ORF5431P | |
| 5432 | 74 aa conserved hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3933 | 39 aa hypothetical protein | |||
| 3934 | M | adenine specific DNA methylase Mod | M.Csp7424ORF3934P | |
| 3935 | 122 aa hypothetical protein | |||