Magnetospirillum species XM-1 |
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Putative Magnetospirillum species XM-1 RM systems
Ref: Wang,Yinzhao unpublished
REBASE ref # 18165
| Sequence length: | GenBank #: | |
| chromosome I: | 4,825,187 bp | LN997848 |
| plasmid II: | 167,290 bp | LN997849 |
REBASE acronym: MspXM1
Org_num: 18017
All begin XM1_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 444 | conserved protein of unknown function | |||
| 445 | M | M.MspXM1ORF4748P (97% identity) | M.MspXM1ORF445P | |
| 446 | S | S.Smu438ORF10480P (42% identity) | S.MspXM1ORF445P | |
| 447 | R | MspXM1ORF4748P (55% identity) | MspXM1ORF445P | |
| 448 | conserved protein of unknown function | |||
| 4744 | conserved protein of unknown function (Predicted | |||
| 4745 | R | MspXM1ORF445P (55% identity) | MspXM1ORF4748P | |
| 4746 | protein of unknown function | |||
| 4747 | S | S.Ara30147ORF5565P (37% identity) | S.MspXM1ORF4748P | |
| 4748 | M | M.MspXM1ORF445P (97% identity) | M.MspXM1ORF4748P | |
| 4749 | conserved protein of unknown function | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 15 | conserved protein of unknown function | |||
| 16 | M | M.Sva43931ORF38060P (48% identity) | ACCGGT | M.MspXM1ORF16P |
| ??? | V | V.AavSF12ORF18565P (50% identity) | V.MspXM1ORF16P | |
| 17 | ISRSO14-transposase orfB protein | |||
| 36 | conserved protein of unknown function | |||
| 37 | M | M1.MspSO1ORF10894P (80% identity) | M1.MspXM1ORF37P | |
| 38 | M | M.MmaMS1ORF1422P (95% identity) | M2.MspXM1ORF37P | |
| 39 | conserved protein of unknown function | |||
| 460 | conserved protein of unknown function | |||
| 461 | M | M.MspME1ORF20845P (74% identity) | M.MspXM1ORF461P | |
| 463 | conserved protein of unknown function | |||
| 1336 | conserved exported protein of unknown function | |||
| 1337 | M | M.MspME1ORF14790P (97% identity) | GANTC | M.MspXM1ORF1337P |
| 1338 | ribonuclease HII, degrades RNA of DNA-RNA | |||
| 2615 | Terminase small subunit | |||
| 2616 | M | M2.PfeP105ORF36615P (29% identity) | M.MspXM1ORF2616P | |
| 2617 | conserved protein of unknown function | |||
| 2956 | conserved protein of unknown function | |||
| 2957 | M | M.MmaAORF2190aP (89% identity) | M.MspXM1ORF2957P | |
| 2958 | cheY-like superfamily | |||
| 4094 | protein of unknown function (putative phage tail | |||
| 4095 | M | M.UviJGIORFK2P (76% identity) | M.MspXM1ORF4095P | |
| 4096 | transposase | |||
| 4610 | protein of unknown function | |||
| 4611 | M | M.PpuND6ORF85P (57% identity) | M.MspXM1ORF4611P | |
| 4612 | conserved protein of unknown function | |||
| plasmid II | ||||
| 34 | protein of unknown function (putative plasmid | |||
| 35 | M | M.MspME1ORF10930P (98% identity) | CCNGG | M.MspXM1ORF35P |
| 36 | protein of unknown function | |||
| 80 | protein of unknown function | |||
| 81 | M | M.MspME1ORF10680P (98% identity) | CTNNAG | M.MspXM1ORF81P |
| 82 | type I restriction-modification system | |||
| 121 | protein of unknown function | |||
| 122 | M | DNA adenine methylase | GATC | M.MspXM1ORF122P |
| 123 | protein of unknown function | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 2067 | protein of unknown function | |||
| 2068 | R | Rsp362ORF3460P (56% identity) | MspXM1ORF2068P | |
| 2069 | conserved membrane protein of unknown function | |||
| 2809 | Helicase | |||
| 2811 | M | M.Nsp79ORF8P (66% identity) | M.MspXM1ORF2811P | |
| 2812 | R | BpsD286IVP (74% identity) | MspXM1ORF2811P | |
| 2813 | protein of unknown function | |||