Ref: Hjerde,E. et al. unpublished

REBASE ref # 10783

Sequence length:GenBank #:
chromosome 1: 3,325,165 bp FM178379 (NC_011312)
chromosome 2: 1,206,461 bp FM178380 (NC_011313)

REBASE acronym: AsaLF

Org_num: 5167

 

All begin VSAL_I, VSAL_II

Type I
ORF Gene Most similar Specificity Name
 
chromosome 1
 
1789 238 aa conserved hypothetical protein
1790 R AwoDORF1175P (0% identity) AsaLFORF1792P
1791 S S.AwoDORF1175P (0% identity) S.AsaLFORF1792P
1792 M M.AwoDORF1175P (0% identity) M.AsaLFORF1792P
1793 exported protein
 
2482 ABC transporter, ATP-binding domain
2483 R VleF12IP (0% identity) AsaLFORF2483P
2487 transposase (pseudogene)
 
2482 ABC transporter, ATP-binding domain
??? R AsaLFORF2483P (0% identity) AsaLFORFAP
2484 transposase
Type II
ORF Gene Most similar Specificity Name
 
chromosome 1
 
2724 cell division protein
2725 M M.AwoDDamP (0% identity) GATC M.AsaLFDamP
2726 ribulose-phosphate 3-epimerase
 
chromosome 2
 
411 637 aa hypothetical protein
412 M M.VfiAORF1049P (0% identity) M.AsaLFORF412P
413 membrane protein
 
502 bacteriophage integrase (fragment)
503 M M.Aba3909ORFAP (0% identity) M.AsaLFORF503P
504 signal transduction protein, histidine kinase