Xylella fastidiosa CO33 |
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Putative Xylella fastidiosa CO33 RM systems
Ref: Giampetruzzi,A. et al. Genome Announc 3 (6), e01472-15 (2015)
REBASE ref # 21119
Contig set: 2,681,926 bp
GenBank #: LJZW00000000 (NZ_LJZW00000000)
REBASE acronym: XfaCO33
Org_num: 17795
All begin AOT81_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 140 | pseudogene | |||
| 145 | M | M.Xfa78ORF11615P (100% identity) | M.XfaCO33ORF145P | |
| 150 | 84 aa hypothetical protein | |||
| 155 | S | S.Xfa78ORF11615P (100% identity) | S.XfaCO33ORF145P | |
| 160 | R | Xfa78ORF11615P (100% identity) | XfaCO33ORF145P | |
| 165 | 234 aa hypothetical protein | |||
| 6335 | metal-dependent hydrolase | |||
| ??? | R | Xfa78ORF1220P (91% identity) | XfaCO33ORF6365P | |
| 6355 | pseudogene | |||
| 6360 | S | S.XfaS2ORF1265P (96% identity) | S.XfaCO33ORF6365P | |
| 6365 | M | M.Xfa78ORF1220P (100% identity) | M.XfaCO33ORF6365P | |
| 6370 | pseudogene | |||
| 165 | 234 aa hypothetical protein | |||
| 170 | M | M.Xfa78ORF11590P (100% identity) | M.XfaCO33ORF170P | |
| 175 | S | S.Xfa78ORF11590P (100% identity) | S.XfaCO33ORF170P | |
| 180 | R | Xfa78ORF11590P (99% identity) | XfaCO33ORF170P | |
| 185 | 84 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9790 | transcriptional regulator | |||
| 9795 | R | Xfa78ORF11940P (100% identity) | CGGCCG | XfaCO33ORF9800P |
| 9800 | M | M.Xfa78ORF11940P (100% identity) | CGGCCG | M.XfaCO33ORF9800P |
| 9805 | 73 aa hypothetical protein | |||
| 11515 | 75 aa hypothetical protein | |||
| 11520 | M | M.Xfa8740ORF6180P (100% identity) | RGATCY | M.XfaCO33ORF11520P |
| 11525 | R | Xfa8740ORF6180P (100% identity) | RGATCY | XfaCO33ORF11520P |
| 11530 | restriction endonuclease | |||
| 11525 | restriction endonuclease | |||
| 11530 | R | Xfa78ORF8485P (100% identity) | TTCGAA | XfaCO33ORF11535P |
| 11535 | M | M.Xfa8073ORF8710P (100% identity) | TTCGAA | M.XfaCO33ORF11535P |
| 11540 | 135 aa hypothetical protein | |||
| 7395 | peptidase | |||
| 7400 | M | M.Xfa78ORF5645P (100% identity) | M.XfaCO33ORF7400P | |
| 7405 | 232 aa hypothetical protein | |||
| 8720 | histidine kinase | |||
| 8725 | M | M.Xfav13ORF3100P (98% identity) | GTCGAC | M.XfaCO33ORF8725P |
| 8730 | R | Xfa78ORF3070P (100% identity) | GTCGAC | XfaCO33ORF8725P |
| 8735 | pseudogene | |||
| 2285 | peptidase | |||
| 2290 | M | M.Xfa78ORF3435P (100% identity) | M.XfaCO33ORF2290P | |
| 2295 | 240 aa hypothetical protein | |||
| 3835 | tryptophan--tRNA ligase | |||
| ??? | M | M.Xfa3ORF9360P (100% identity) | CCSGG | M.XfaCO33ORF3840P |
| ??? | R | Xfa78ORF9375P (99% identity) | CCSGG | XfaCO33ORF3840P |
| 3855 | DNA primase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2720 | 3-oxoacyl-ACP synthase | |||
| 2725 | M | M.Xfa78ORF4755P (100% identity) | M.XfaCO33ORF2725P | |
| 2730 | R | Xfa78ORF4755P (100% identity) | XfaCO33ORF2725P | |
| 2735 | alpha/beta hydrolase | |||