Bacteroides periocalifornicus |
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Putative Bacteroides periocalifornicus RM systems
Ref: McLean,J.S. et al. Genome Announc 3 (6) (2015)
REBASE ref # 21104
GenBank #: LIIK00000000
REBASE acronym: Bpe128
Org_num: 17705
All begin AL399_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5530 | 165 aa hypothetical protein | |||
| 5535 | M | M.Rla512ORF18190P (68% identity) | M.Bpe128ORF5535P | |
| 5540 | cell filamentation protein Fic | |||
| 5545 | S | S.KpnF1043ORF17305P (34% identity) | S.Bpe128ORF5535P | |
| 5550 | transcriptional regulator | |||
| 5555 | R | DEAD/DEAH box helicase | Bpe128ORF5535P | |
| 5560 | 635 aa hypothetical protein | |||
| 5185 | 87 aa hypothetical protein | |||
| 5190 | M | type I restriction endonuclease EcoR124II subunit M | M.Bpe128ORF5190P | |
| 5195 | R | DEAD/DEAH box helicase | Bpe128ORF5190P | |
| 5200 | 449 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8440 | 680 aa hypothetical protein | |||
| 8445 | R | Cho1467ORF6225P (50% identity) | Bpe128ORF8450P | |
| 8450 | M | M.Pme3C08ORF874P (63% identity) | GAATTC | M.Bpe128ORF8450P |
| 8455 | pyruvate phosphate dikinase | |||
| 8330 | 1093 aa hypothetical protein | |||
| 8335 | R | PmeBin55ORFEP (55% identity) | GATC | Bpe128ORF8340P |
| 8340 | M | M.Mfu14723ORF12805P (64% identity) | GATC | M.Bpe128ORF8340P |
| 8345 | 115 aa hypothetical protein | |||
| 4530 | 228 aa hypothetical protein | |||
| 4535 | M | M.Pta51259ORF2669P (46% identity) | GDGCHC | M.Bpe128ORF4535P |
| 4540 | 356 aa hypothetical protein | |||
| 4190 | excinuclease ABC subunit A | |||
| 4195 | M | M.BneMS4ORFDP (61% identity) | GGNCC | M.Bpe128ORF4195P |
| 4200 | lipopolysaccharide ABC transporter, ATP-binding protein LptB | |||
| 1070 | 817 aa hypothetical protein | |||
| 1075 | R | M.SspTTNORF965P (13% identity) | Bpe128ORF1075P | |
| 1080 | 548 aa hypothetical protein | |||
| 3395 | restriction endonuclease, partial | |||
| 3400 | RM | Bno1461ORF11595P (41% identity) | Bpe128ORF3400P | |
| 3405 | 343 aa hypothetical protein | |||
| 720 | cell filamentation protein Fic | |||
| 725 | M | DNA adenine methylase | M.Bpe128ORF725P | |
| 730 | R | Pco7716ORF2169P (45% identity) | Bpe128ORF725P | |
| 735 | 1359 aa hypothetical protein | |||
| 735 | 1359 aa hypothetical protein | |||
| 740 | RM | TstWB1ORF5675P (46% identity) | Bpe128ORF740P | |
| 745 | S | S1.Pin2931ORF5975P (32% identity) | S.Bpe128ORF740P | |
| 750 | 241 aa hypothetical protein | |||
| 755 | 720 aa hypothetical protein | |||
| 760 | M | M.PspF0648I (45% identity) | GASTC | M.Bpe128ORF760P |
| 765 | DNA methyltransferase | |||
| 760 | DNA methyltransferase | |||
| 765 | M | M.Pxy11841ORFAP (64% identity) | CTGCAG | M.Bpe128ORF765P |
| 770 | R | Pxy11841ORFAP (51% identity) | CTGCAG | Bpe128ORF765P |
| 775 | DNA gyrase subunit A | |||
| 1320 | 105 aa hypothetical protein | |||
| ??? | R | 79 aa hypothetical protein | GRCGYC | Bpe128ORF1325P |
| 1325 | M | M.Pru23ORF666P (37% identity) | GRCGYC | M.Bpe128ORF1325P |
| 1330 | 124 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8020 | nicotinate-nucleotide pyrophosphorylase | |||
| 8025 | M | DNA -methyltransferase | M.Bpe128ORF8025P | |
| 8030 | R | PspE225ORF7505P (48% identity) | Bpe128ORF8025P | |
| 8035 | 800 aa hypothetical protein | |||