Lactobacillus delbrueckii subs. bulgaricus MN-BM-F01 |
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Putative Lactobacillus delbrueckii subs. bulgaricus MN-BM-F01 RM systems
Ref: Yang,L. et al. unpublished
REBASE ref # 21414
Complete sequence: 1,875,071 bp
GenBank #: CP013610
REBASE acronym: LdeF01
Org_num: 17646
All begin AT236_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1018 | 43 aa hypothetical protein | |||
| 1019 | R | LdeP3MRAORF4600P (99% identity) | CAAGNNNNNRTTA | LdeF01IIP |
| 1020 | M | M.LdeR03ORF4660P (100% identity) | CAAGNNNNNRTTA | M.LdeF01II |
| 1021 | S | S2.LdeBORF1052P (94% identity) | CAAGNNNNNRTTA | S1.LdeF01II |
| 1022 | integrase | |||
| 1023 | S | S2.Lde87ORF898P (100% identity) | S2.LdeF01IIP | |
| 1024 | 187 aa hypothetical protein | |||
| 1139 | 64 aa hypothetical protein | |||
| 1140 | R | LdeL99ORF1031P (100% identity) | AGTNNNNNGTG | LdeF01IP |
| 1141 | type I restriction modification DNA specificity | |||
| 1142 | S | S.LdeL99ORF1031P (100% identity) | AGTNNNNNGTG | S.LdeF01I |
| 1143 | M | M.LdeL99ORF1031P (100% identity) | AGTNNNNNGTG | M.LdeF01I |
| 1144 | 38 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1199 | 861 aa hypothetical protein | |||
| 1200 | RM | Lde17838ORF5460P (70% identity) | LdeF01ORF1200P | |
| 1201 | ATPase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 36 | membrane protein | |||
| 37 | R | Lde1519ORF1204P (99% identity) | LdeF01ORF37P | |
| 38 | membrane protein | |||
| 442 | RNA methyltransferase | |||
| 443 | R | LdeR03MrrP (100% identity) | LdeF01Mrr2P | |
| 444 | carbonate dehydratase | |||
| 1136 | ATP-dependent Lon protease | |||
| 1137 | R | LdeL99MrrP (100% identity) | LdeF01MrrP | |
| 1138 | 41 aa hypothetical protein | |||
| 1740 | 101 aa hypothetical protein | |||
| 1741 | R | LdeP3MRAORF7925P (99% identity) | LdeF01ORF1741P | |
| 1742 | UDP-glucose 4-epimerase | |||
| 1925 | 66 aa hypothetical protein | |||
| 1926 | R | Lde1519McrCP (100% identity) | LdeF01McrCP | |
| ??? | R | Lde1519McrBP (100% identity) | LdeF01McrBP | |
| 1928 | Transposase | |||