Prevotella intermedia OMA14 |
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Putative Prevotella intermedia OMA14 RM systems
Ref: Naito,M. et al. DNA Res. (2015) In press
REBASE ref # 21039
| Sequence length: | GenBank #: | |
| chromosome I: | 2,280,262 bp | AP014597 |
| chromosome II: | 867,855 bp | AP014598 |
REBASE acronym: Pin14
Org_num: 17612
All begin PIOMA14_I_, PIOMA14_II_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 438 | 139 aa conserved hypothetical protein | |||
| 439 | S | S3.Pin2734III (53% identity) | S1.Pin14ORF445P | |
| 440 | bacteriophage integrase | |||
| 441 | S | S2.PspF0043I (97% identity) | S2.Pin14ORF445P | |
| 442 | S | S2.Pme0054ORF3120P (89% identity) | S3.Pin14ORF445P | |
| 443 | 338 aa conserved hypothetical protein with AAA domain | |||
| 444 | 384 aa conserved hypothetical protein with DUF1016 | |||
| 445 | M | M.Pin2734III (100% identity) | M.Pin14ORF445P | |
| 446 | R | Pin2734IIIP (100% identity) | Pin14ORF445P | |
| 447 | 64 aa hypothetical protein with helix-turn-helix | |||
| chromosome II | ||||
| 168 | 90 aa hypothetical protein | |||
| 169 | R | Pin2734IIP (100% identity) | Pin14ORF171P | |
| 170 | 215 aa conserved hypothetical protein | |||
| 171 | M | M.Pin2734II (100% identity) | M.Pin14ORF171P | |
| 172 | 701 aa conserved hypothetical protein with DUF262 | |||
| 173 | 481 aa conserved hypothetical protein with HATPase | |||
| 174 | S | S1.Pin2734II (55% identity) | S1.Pin14ORF171P | |
| 175 | S | S1.Pin2734II (33% identity) | S2.Pin14ORF171P | |
| 176 | S | S4.Pin2734IIP (47% identity) | S3.Pin14ORF171P | |
| 177 | S | S1.Bov145ORF1445P (76% identity) | S4.Pin14ORF171P | |
| 178 | phage integrase | |||
| 433 | 835 aa conserved hypothetical protein | |||
| 434 | R | Pin1653IP (99% identity) | Pin14ORF436P | |
| 435 | S | S.Fma7760AORF873P (42% identity) | S.Pin14ORF436P | |
| 436 | M | M.Pin1741ORF13100P (99% identity) | M.Pin14ORF436P | |
| 437 | probable pyrazinamidase/nicotinamidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 117 | 850 aa conserved hypothetical protein with | |||
| 118 | M | M.Pin14ORF755P (100% identity) | M.Pin14ORF118P | |
| 119 | 108 aa hypothetical protein | |||
| 987 | thymidylate synthase | |||
| 988 | M | M.Pin14ORF1716P (94% identity) | M.Pin14ORF988P | |
| 989 | 80 aa hypothetical protein | |||
| 1031 | 170 aa hypothetical protein | |||
| 1032 | M | M.PinWW414ORF3170P (100% identity) | M.Pin14ORF1032P | |
| 1033 | 134 aa conserved hypothetical protein | |||
| 1618 | 234 aa conserved hypothetical protein with NigD domain | |||
| 1619 | M | M.Pin2734IV (100% identity) | GTYRAC | M.Pin14ORF1619P |
| 1620 | R | Pin2734IVP (100% identity) | GTYRAC | Pin14ORF1619P |
| 1621 | DNA repair protein RecO | |||
| 1715 | 82 aa hypothetical protein | |||
| 1716 | M | M.Pin14ORF988P (94% identity) | M.Pin14ORF1716P | |
| 1717 | thymidylate synthase | |||
| chromosome II | ||||
| 298 | 464 aa conserved hypothetical protein with AAA | |||
| 299 | RM | Pin2734V (100% identity) | Pin14ORF299P | |
| 300 | 628 aa conserved hypothetical protein with SMC-N | |||
| 351 | 389 aa hypothetical protein | |||
| 352 | M | M.Pin2837ORF9450P (97% identity) | M.Pin14ORF352P | |
| 353 | 108 aa hypothetical protein | |||
| 754 | cyclophilin-type peptidyl-prolyl cis-trans | |||
| 755 | M | M.Pin14ORF118P (100% identity) | M.Pin14ORF755P | |
| 756 | 108 aa hypothetical protein | |||