Salmonella enterica Agona SL483 |
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Putative Salmonella enterica Agona SL483 RM systems
Ref: Fricke,W.F. et al. J. Bacteriol. 193 (14), 3556-3568 (2011)
REBASE ref # 10690
Complete sequence: 4,798,660 bp
GenBank #: CP001138 (NC_011149)
REBASE acronym: Sen483
Org_num: 5150
All begin SeAg_B
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4818 | TIR protein | |||
| 4819 | M | M1.SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | M1.Sen483I |
| 4820 | M | M2.SenSA5ORF17266P (99% identity) | CCCNNNNNRTAG | M2.Sen483I |
| 4821 | S | S.SenSA4ORF5001P (100% identity) | CCCNNNNNRTAG | S.Sen483I |
| 4822 | R | SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | Sen483IP |
| 4823 | 310 aa hypothetical protein CKO_03468 | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1126 | metal dependent phosphohydrolase | |||
| 1127 | M | M.SenSA5DcmP (100% identity) | CCWGG | M.Sen483DcmP |
| 1128 | very short patch repair protein | |||
| 1127 | modification methylase EcoRII | |||
| 1128 | V | V.StyUK1DcmP (100% identity) | V.Sen483ORF1127P | |
| 1129 | carboxylate/amino acid/amine transporter | |||
| 2875 | bacteriophage replication gene A | |||
| 2876 | M | M.SenSA5ORF21849P (100% identity) | GATC | M.Sen483ORF2876P |
| 2877 | C4-type zinc finger protein, DksA/TraR family | |||
| 3576 | DNA-binding protein Fis | |||
| 3577 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen483III |
| 3578 | periplasmic protein | |||
| 3682 | ribulose-phosphate 3-epimerase | |||
| 3683 | M | M.StyTDamP (100% identity) | GATC | M.Sen483DamP |
| 3684 | protein DamX | |||
| 4802 | 97 aa conserved hypothetical protein | |||
| 4803 | M | M.SenSA2ORF2906P (92% identity) | CAGCTG | M.Sen483ORF4803P |
| 4804 | 670 aa conserved hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 391 | major facilitator superfamily MFS_1 | |||
| 392 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen483II |
| 393 | R | SenSA5ORF13013P (100% identity) | CAGAG | Sen483IIP |
| 394 | cyanide-insensitive oxidase CioA | |||