Phytoplasma australiense |
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Putative Phytoplasma australiense RM systems
Ref: Tran-Nguyen,L.T. et al. J. Bacteriol. 190 (11), 3979-3991 (2008)
REBASE ref # 10734
Complete sequence: 879,959 bp
GenBank #: AM422018 (NC_010544)
REBASE acronym: PauRPA
Org_num: 5143
All begin PA
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 292 | 201 aa Conserved hypothetical protein | |||
| 293 | S | Type I restriction-modification enzyme | S.PauRPAORF294P | |
| 294 | M | M.Pzi2018ORFBP (18% identity) | M.PauRPAORF294AP | |
| 295 | Retron-type reverse transcriptase,fragment 2 | |||
| 296 | Retron-type reverse transcriptase,fragment 1 | |||
| 297 | M | M.Pzi2018ORFBP (30% identity) | M.PauRPAORF294BP | |
| 298 | 95 aa Conserved hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2 | DNA polymerase III beta subunit | |||
| ??? | M | M.PauSLYORF5P (95% identity) | M.PauRPAORF3P | |
| 5 | 334 aa hypothetical protein | |||
| 249 | 183 aa hypothetical protein | |||
| 250 | M | M.PauSLYORF218P (97% identity) | GATC | M.PauRPADamP |
| 251 | 81 aa Conserved hypothetical protein | |||
| 252 | Uncharacterized phage-associated protein | |||
| 253 | M | M.SspSV19ORF355P (34% identity) | TCNNGA | M.PauRPAORF253P |
| 254 | phage-related protein (endonuclease), | |||
| 290 | phage integrase, fragment | |||
| 291 | M | M.PauRPAORF789P (87% identity) | TCNNGA | M.PauRPAORF291P |
| 292 | 201 aa Conserved hypothetical protein | |||
| 351 | phage integrase | |||
| ??? | M | M.PauRPAORF789P (98% identity) | TCNNGA | M.PauRPAORF352P |
| 354 | 201 aa Conserved hypothetical protein | |||
| 354 | 201 aa Conserved hypothetical protein | |||
| 355 | S | Type I restriction-modification enzyme | S.PauRPAORF355P | |
| 356 | 195 aa hypothetical protein | |||
| 437 | IMP dehydrogenase/GMP reductase, | |||
| 438 | RM | CklJZZORF17835P (9% identity) | PauRPAORF438P | |
| 439 | S | 152 aa hypothetical protein | S.PauRPAORF438P | |
| 440 | Transposase, fragment | |||
| 620 | phage integrase | |||
| 621 | M | M.PauRPAORF789P (51% identity) | TCNNGA | M.PauRPAORF621P |
| 622 | Retron-type reverse transcriptase, fragment | |||
| 788 | phage integrase | |||
| 789 | M | M.PauRPAORF352P (98% identity) | TCNNGA | M.PauRPAORF789P |
| 790 | DNA-directed RNA polymerase specialized sigma | |||