Ref: Lucas,S. et al. unpublished

REBASE ref # 10741

Complete sequence: 2,885,038 bp

GenBank #: CP001132 (NC_011206)

REBASE acronym: AfeB

Org_num: 5153

 

All begin Lferr_

Type I
ORF Gene Most similar Specificity Name
 
225 261 aa conserved hypothetical protein
226 R AfeAORF1577P (97% identity) AfeBORF228P
227 S S.Afe18981ORF23950P (60% identity) S.AfeBORF228P
228 M M.AfeAORF1577P (99% identity) M.AfeBORF228P
229 PilT protein domain protein
 
831 35 aa conserved hypothetical protein
832 R AfeYQN3ORF3730P (100% identity) AfeBORF833P
833 M M.AfeYQN3ORF3730P (100% identity) M.AfeBORF833P
834 death-on-curing family protein
835 S S.Asp221ORFSP (62% identity) S.AfeBORF833P
836 613 aa hypothetical protein
 
963 85 aa conserved hypothetical protein
964 M M.AfeYQN3ORF4390P (100% identity) M.AfeBORF964P
965 transcriptional regulator
966 355 aa conserved hypothetical protein
967 S S.AfeYQN3ORF4390P (96% identity) S.AfeBORF964P
968 916 aa conserved hypothetical protein
969 R AfeYQN3ORF4390P (100% identity) AfeBORF964P
970 protein of unknown function DUF45
 
2002 transcriptional regulator, ArsR family
2003 M M.AfeYQN3ORF10580P (100% identity) M.AfeBORF2003P
2004 67 aa conserved hypothetical protein
2005 anticodon nuclease
2006 31 aa hypothetical protein
2007 DEAD/DEAH box helicase domain protein
2008 262 aa conserved hypothetical protein
2009 S S.AfeYQN3ORF10580P (100% identity) S.AfeBORF2003P
2010 118 aa hypothetical protein
2011 transcriptional regulator
2012 R AfeYQN3ORF10580P (100% identity) AfeBORF2003P
2013 UbiD family decarboxylase
 
2412 260 aa hypothetical protein
2413 R AfeBYMORF13885P (100% identity) AfeBORF2418P
2414 261 aa hypothetical protein
2415 S S.AfeBYMORF13885P (100% identity) S.AfeBORF2418P
2416 73 aa conserved hypothetical protein
2417 88 aa hypothetical protein
2418 M M.AfeBYMORF13885P (100% identity) M.AfeBORF2418P
2419 147 aa hypothetical protein
Type II
ORF Gene Most similar Specificity Name
 
138 398 aa hypothetical protein
139 M M.AspAMDORF6545P (100% identity) TGGCCA M.AfeBORF139P
140 single-strand binding protein
 
1278 398 aa hypothetical protein
1279 M M.AspAMDORF6545P (100% identity) TGGCCA M.AfeBORF1279P
1280 single-strand binding protein
 
1286 transcriptional regulator
1287 RM AspAMDIV (100% identity) AfeBORF1287P
1288 82 aa hypothetical protein
Type III
ORF Gene Most similar Specificity Name
 
2791 287 aa conserved hypothetical protein
2792 R AfeYQN3ORF14745P (88% identity) AfeBORF2793P
2793 M M.AfeYQN3ORF14745P (100% identity) M.AfeBORF2793P
2794 894 aa conserved hypothetical protein
Type IV
ORF Gene Most similar Specificity Name
 
2387 integrase catalytic subunit
2388 R AfeAMrr2P (74% identity) AfeBMrrP
2389 63 aa hypothetical protein
 
2784 51 aa hypothetical protein GGI1_19494
2785 R AfeBYMMrrP (100% identity) AfeBMrr2P
2786 integrase catalytic region