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Putative Acidithiobacillus ferrooxidans ATCC 53993 RM systems
Ref: Lucas,S. et al. unpublished
REBASE ref # 10741
Complete sequence: 2,885,038 bp
GenBank #: CP001132 (NC_011206)
REBASE acronym: AfeB
Org_num: 5153
All begin Lferr_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
225 | 261 aa conserved hypothetical protein | |||
226 | R | AfeAORF1577P (97% identity) | AfeBORF228P | |
227 | S | S.Afe18981ORF23950P (60% identity) | S.AfeBORF228P | |
228 | M | M.AfeAORF1577P (99% identity) | M.AfeBORF228P | |
229 | PilT protein domain protein | |||
831 | 35 aa conserved hypothetical protein | |||
832 | R | AfeYQN3ORF3730P (100% identity) | AfeBORF833P | |
833 | M | M.AfeYQN3ORF3730P (100% identity) | M.AfeBORF833P | |
834 | death-on-curing family protein | |||
835 | S | S.Asp221ORFSP (62% identity) | S.AfeBORF833P | |
836 | 613 aa hypothetical protein | |||
963 | 85 aa conserved hypothetical protein | |||
964 | M | M.AfeYQN3ORF4390P (100% identity) | M.AfeBORF964P | |
965 | transcriptional regulator | |||
966 | 355 aa conserved hypothetical protein | |||
967 | S | S.Afe4253ORFDP (98% identity) | S.AfeBORF964P | |
968 | 916 aa conserved hypothetical protein | |||
969 | R | AfeYQN3ORF4390P (100% identity) | AfeBORF964P | |
970 | protein of unknown function DUF45 | |||
2002 | transcriptional regulator, ArsR family | |||
2003 | M | M.AfeYQN3ORF10580P (100% identity) | M.AfeBORF2003P | |
2004 | 67 aa conserved hypothetical protein | |||
2005 | anticodon nuclease | |||
2006 | 31 aa hypothetical protein | |||
2007 | DEAD/DEAH box helicase domain protein | |||
2008 | 262 aa conserved hypothetical protein | |||
2009 | S | S.AfeYQN3ORF10580P (100% identity) | S.AfeBORF2003P | |
2010 | 118 aa hypothetical protein | |||
2011 | transcriptional regulator | |||
2012 | R | AfeYQN3ORF10580P (100% identity) | AfeBORF2003P | |
2013 | UbiD family decarboxylase | |||
2412 | 260 aa hypothetical protein | |||
2413 | R | AfeBYMORF13885P (100% identity) | AfeBORF2418P | |
2414 | 261 aa hypothetical protein | |||
2415 | S | S.AfeBYMORF13885P (100% identity) | S.AfeBORF2418P | |
2416 | 73 aa conserved hypothetical protein | |||
2417 | 88 aa hypothetical protein | |||
2418 | M | M.AfeBYMORF13885P (100% identity) | M.AfeBORF2418P | |
2419 | 147 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
138 | 398 aa hypothetical protein | |||
139 | M | M.AspAMDORF6545P (100% identity) | TGGCCA | M.AfeBORF139P |
140 | single-strand binding protein | |||
1278 | 398 aa hypothetical protein | |||
1279 | M | M.AspAMDORF6545P (100% identity) | TGGCCA | M.AfeBORF1279P |
1280 | single-strand binding protein | |||
1286 | transcriptional regulator | |||
1287 | RM | AspAMDIV (100% identity) | AfeBORF1287P | |
1288 | 82 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
2791 | 287 aa conserved hypothetical protein | |||
2792 | R | AfeYQN3ORF14745P (88% identity) | AfeBORF2793P | |
2793 | M | M.AfeYQN3ORF14745P (100% identity) | M.AfeBORF2793P | |
2794 | 894 aa conserved hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
2387 | integrase catalytic subunit | |||
2388 | R | AfeAMrr2P (74% identity) | AfeBMrrP | |
2389 | 63 aa hypothetical protein | |||
2784 | 51 aa hypothetical protein GGI1_19494 | |||
2785 | R | AfeBYMMrrP (100% identity) | AfeBMrr2P | |
2786 | integrase catalytic region |