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Putative Haemophilus influenzae HI1408 RM systems
Ref: Whitby,P.W. et al. PLoS ONE 10 (9), E0136867 (2015)
REBASE ref # 20926
Contig set: 1,901,953 bp
GenBank #: LFDJ00000000 (NZ_LFDJ00000000)
REBASE acronym: Hin1408
Org_num: 17504
All begin ABN48_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
1885 | portal vertex protein | |||
1890 | R | HinfORFCP (97% identity) | Hin1408ORF1915P | |
1895 | 77 aa hypothetical protein CGSHiGG_01545 | |||
1900 | 74 aa hypothetical protein CK45_03755 | |||
1905 | 174 aa hypothetical protein | |||
1910 | S | S.Hha10839ORF1378P (74% identity) | S.Hin1408ORF1915P | |
1915 | M | M.HseH68ORF6985P (94% identity) | M.Hin1408ORF1915P | |
1920 | ribosome-binding factor A | |||
6600 | 257 aa hypothetical protein | |||
6605 | R | Hha201919ORF1730P (97% identity) | Hin1408ORF6620P | |
6610 | S | S.Hha201919ORF1730P (67% identity) | S.Hin1408ORF6620P | |
6615 | pseudogene | |||
6620 | M | M.Hha201919ORF1730P (97% identity) | M.Hin1408ORF6620P | |
6625 | 30S ribosomal protein S16 | |||
8210 | oligopeptidase A | |||
8215 | M | M.HinIII8ORF7870P (100% identity) | M.Hin1408ORF8215P | |
8220 | S | S.HinIII8ORF7870P (100% identity) | S.Hin1408ORF8215P | |
8225 | 2-hydroxyacid dehydrogenase | |||
8230 | R | Hin8759ORF6800P (99% identity) | Hin1408ORF8215P | |
8235 | membrane protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
85 | Mu-like prophage FluMu protein com | |||
90 | M | M.Hin1426ORF3935P (100% identity) | BA | M.Hin1408ORF90P |
95 | 87 aa hypothetical protein | |||
4585 | 138 aa hypothetical protein | |||
4590 | M | M1.HinIII6ORF10280P (98% identity) | M1.Hin1408ORF4590P | |
4595 | M | M2.HseH68ORF7775P (97% identity) | M2.Hin1408ORF4590P | |
4600 | RM | Hin12699ORF856P (97% identity) | Hin1408ORF4590P | |
4605 | transporter | |||
6575 | molybdenum cofactor guanylyltransferase | |||
6580 | M | M.HinIII6ORF4860P (100% identity) | GATC | M.Hin1408ORF6580P |
6585 | 3-dehydroquinate synthase | |||
7195 | valine--tRNA ligase | |||
7200 | R | Hin9224ORF6935P (100% identity) | GCGC | Hin1408ORF7205P |
7205 | M | M.Hin9224ORF6935P (100% identity) | GCGC | M.Hin1408ORF7205P |
7210 | pseudogene | |||
2465 | replication P | |||
2470 | M | M.Hin12194ORF684P (95% identity) | GATC | M.Hin1408ORF2470P |
2475 | 307 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
1620 | 155 aa hypothetical protein | |||
1625 | M | M.Hin1426ORF5700P (98% identity) | M.Hin1408ORF1625P | |
1630 | R | Cho10426ORF1522P (28% identity) | Hin1408ORF1625P | |
1635 | ATP-dependent helicase |