Escherichia coli CQSW20 |
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Putative Escherichia coli CQSW20 RM systems
Ref: Zhu,J. et al. unpublished
REBASE ref # 21019
Complete sequence: 4,579,074 bp
GenBank #: CP013253
REBASE acronym: EcoSW20
Org_num: 17487
All begin ATL78_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 16955 | restriction endonuclease | |||
| 16960 | R | Esp17TGCORF18925P (100% identity) | AACNNNNNNGTGC | EcoSW20ORF16965P |
| 16965 | M | M.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | M.EcoSW20ORF16965P |
| 16970 | S | S.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | S.EcoSW20ORF16965P |
| 16975 | 113 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 60 | 59 aa hypothetical protein | |||
| 65 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.EcoSW20ORF65P |
| 70 | Fis family transcriptional regulator | |||
| 6680 | hydrolase | |||
| 6685 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoSW20DcmP |
| 6690 | V | V.SflFF64DcmP (100% identity) | V.EcoSW20DcmP | |
| 6695 | multidrug DMT transporter | |||
| 10660 | cruciferin | |||
| 10665 | M | M.SenHNK130ORF1185P (100% identity) | GATC | M.EcoSW20ORFAP |
| 10670 | 79 aa hypothetical protein | |||
| 22080 | cell division protein DamX | |||
| 22085 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoSW20DamP |
| 22090 | ribulose phosphate epimerase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11185 | anti-adapter protein IraM | |||
| 11190 | R | EcoP231ORF14085P (100% identity) | YCGR | EcoSW20ORF11190P |
| 11195 | DNA-invertase | |||
| 16950 | GTP-binding protein | |||
| 16955 | R | SenHNK130MrrP (100% identity) | EcoSW20MrrP | |
| 16960 | pseudogene | |||
| 16975 | 113 aa hypothetical protein | |||
| 16980 | R | SenHNK130McrBP (100% identity) | EcoSW20McrBP | |
| 16985 | R | Msa17McrC2P (100% identity) | EcoSW20McrCP | |
| 16990 | 906 aa hypothetical protein | |||