Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
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Putative Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 RM systems
Ref: Ravel,J. et al. unpublished
REBASE ref # 10690
| Sequence length: | GenBank #: | |
| Chromosome: | 4,888,768 bp | CP001120 (NC_011083) |
| plasmid pSL476_91: | 91,374 bp | CP001118 (NC_011081) |
REBASE acronym: SenH
Org_num: 5120
All begin SeHA_A, SeHA_C
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4711 | 180 aa hypothetical protein L408_03612 | |||
| 4712 | R | SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | SenHORF4713P |
| 4713 | M | M.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | M.SenHORF4713P |
| 4714 | S | S.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | S.SenHORF4713P |
| 4715 | 255 aa conserved hypothetical protein | |||
| 4929 | endoribonuclease SymE | |||
| 4930 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenHORF4931P |
| 4931 | M | M.Sens12373ORF19415P (100% identity) | GAGNNNNNNRTAYG | M.SenHORF4931P |
| 4932 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | SenHORF4931P |
| 4933 | Mrr restriction system protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1109 | bacteriophage protein | |||
| 1110 | M | M.Sens12373ORF14090P (100% identity) | GATC | M.SenHORF1110P |
| 1111 | exonuclease | |||
| 2206 | carboxylate/amino acid/amine transporter | |||
| 2207 | V | V.StyTDcmP (100% identity) | V.SenHDcmP | |
| 2208 | M | M.SenZ223DcmP (100% identity) | CCWGG | M.SenHDcmP |
| 2209 | metal dependent phosphohydrolase | |||
| 3496 | replication gene A protein | |||
| 3497 | M | M.SenS1602ORF3445P (100% identity) | GATC | M.SenHORF3497P |
| 3498 | gp91 | |||
| 3683 | DNA-binding protein Fis | |||
| 3684 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenHORF3684P |
| 3685 | periplasmic protein | |||
| 3789 | ribulose-phosphate 3-epimerase | |||
| 3790 | M | M.StyTDamP (100% identity) | GATC | M.SenHDamP |
| 3791 | protein DamX | |||
| 4894 | helicase family protein | |||
| 4895 | RM | Sens12373ORF19575P (100% identity) | GATCAG | SenHORF4895P |
| plasmid pSL476_91 | ||||
| 42 | 41 aa conserved hypothetical protein | |||
| 43 | M | M.StyR64ORFAP (100% identity) | M.SenHORF43P | |
| 44 | 73 aa conserved hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 451 | major facilitator superfamily MFS_1 | |||
| 452 | M | M.SenZ223ORF2150P (100% identity) | CAGAG | M.SenHORF452P |
| 453 | R | Sens12373ORF17180P (99% identity) | CAGAG | SenHORF452P |
| 454 | cytochrome bd-II oxidase subunit 1 | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4932 | type I restriction enzyme EcoKI R protein | |||
| 4933 | R | StyUK1MrrP (100% identity) | SenHMrrP | |
| 4934 | 95 aa conserved hypothetical protein | |||