Salmonella enterica subsp. enterica serovar Typhimurium FORC_020 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium FORC_020 RM systems
Ref: Lee,J.-H. et al. unpublished
REBASE ref # 21013
Complete sequence: 4,799,793 bp
GenBank #: CP012144
REBASE acronym: Sen20
Org_num: 17481
All begin FORC20_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3927 | 322 aa hypothetical protein | |||
| 3928 | R | Spy5740IP (100% identity) | Sen20ORF3929P | |
| 3929 | M | M.Sen24417ORF19455P (100% identity) | M.Sen20ORF3929P | |
| 3930 | S | S.Sens661ORF19445P (100% identity) | S.Sen20ORF3929P | |
| 3931 | 106 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 348 | DamX, an inner membrane protein involved in bile | |||
| 349 | M | Methyl-directed repair DNA adenine methylase | GATC | M.Sen20DamP |
| 350 | Ribulose-phosphate 3-epimerase | |||
| 442 | 54 aa hypothetical protein | |||
| 443 | M | Adenine-specific methyltransferase | ATGCAT | M.Sen20ORF443P |
| 444 | DNA-binding protein Fis | |||
| 1802 | metal-dependent phosphohydrolase | |||
| 1803 | M | M.Sen24417DcmP (100% identity) | CCWGG | M.Sen20DcmP |
| 1804 | V | V.StyUK1DcmP (100% identity) | V.Sen20DcmP | |
| 1805 | Permease of the drug/metabolite transporter | |||
| 2891 | Phage exonuclease | |||
| 2892 | M | M.SspsA7ORF8410P (100% identity) | GATC | M.Sen20ORF2892P |
| 2893 | 80 aa hypothetical protein | |||
| 4003 | catabolite gene activator and regulatory subunit | |||
| 4004 | M | M.Sen5773ORF4454P (98% identity) | CCWGG | M.Sen20ORF4004P |
| 4005 | R | Sen24417ORF19805P (99% identity) | CCWGG | Sen20ORF4004P |
| 4006 | arylsulfatase regulatory protein | |||
| 4460 | 380 aa hypothetical protein | |||
| 4461 | R | Sen0403ORFCP (100% identity) | GTCGAC | Sen20ORF4462P |
| ??? | M | M.SspS13ORF1655P (100% identity) | GTCGAC | M.Sen20ORF4462P |
| 4463 | Phage replication protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3498 | Cytochrome bd2, subunit I | |||
| 3499 | R | SenNCTR361ORF2010P (99% identity) | CAGAG | Sen20ORF3500P |
| 3500 | M | M.SenZYXORFDP (100% identity) | CAGAG | M.Sen20ORF3500P |
| 3501 | metabolite transport protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1098 | asch domain protein | |||
| 1099 | M | M.Sen8271ORF1499P (100% identity) | GATC | M.Sen20ORF1099P |
| 1100 | 37.8 kDa protein in gpa 5region | |||