Helicobacter typhlonius |
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Putative Helicobacter typhlonius RM systems
Ref: Anvar Seyed,Yahya unpublished
REBASE ref # 26262
Complete sequence: 1,920,832 bp
GenBank #: LN907858
REBASE acronym: Hty1
Org_num: 17452
All begin BN2458_PEG
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 706 | Anthranilate synthase, amidotransferase | |||
| ??? | M | M.Hty6810ORF3025P (100% identity) | M.Hty1ORF707P | |
| 709 | 260 aa Hypothetical protein | |||
| 710 | 52 aa Hypothetical protein | |||
| 711 | 73 aa Hypothetical protein | |||
| 712 | YafQ toxin protein | |||
| 713 | S | S.Hsp1616ORF7110P (62% identity) | S.Hty1ORF707P | |
| 714 | Uncharacterized protein MJECL43 | |||
| 715 | 70 aa Hypothetical protein | |||
| 716 | Domain of unknown function (DUF332) superfamily | |||
| 717 | R | Hty6810ORF2570P (82% identity) | Hty1ORF707P | |
| 718 | 198 aa Hypothetical protein | |||
| 915 | predicted secreted protein | |||
| 916 | R | Hsp1614ORF5670P (96% identity) | Hty1ORF923P | |
| 917 | 255 aa Hypothetical protein | |||
| 918 | 240 aa Hypothetical protein | |||
| 919 | 394 aa Hypothetical protein | |||
| 920 | 153 aa Hypothetical protein | |||
| 921 | S | S.Hty6810ORF3915P (97% identity) | S.Hty1ORF923P | |
| 922 | MloA protein, putative | |||
| 923 | M | M.Hty6810ORF3915P (100% identity) | M.Hty1ORF923P | |
| 924 | Peptide methionine sulfoxide reductase MsrB | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2 | 42 aa Hypothetical protein | |||
| 3 | M | M.HhiYS1ORFAP (58% identity) | GANTC | M.Hty1I |
| 4 | Molybdopterin-guanine dinucleotide biosynthesis | |||
| 19 | 42 aa Hypothetical protein | |||
| ??? | R | Hty6810ORF2770P (100% identity) | GTAC | Hty1IVP |
| 22 | M | M.Hty6810ORF2770P (100% identity) | GTAC | M.Hty1IV |
| 23 | 237 aa Hypothetical protein | |||
| 34 | predicted secreted protein | |||
| 35 | M | M.Hty6810ORF2705P (100% identity) | CATG | M.Hty1ORF35P |
| 36 | R | 87 aa Hypothetical protein | CATG | Hty1ORF35P |
| 37 | 40 aa Hypothetical protein | |||
| 318 | 37 aa Hypothetical protein | |||
| 319 | R | Hty6810ORF9525P (100% identity) | GTNNAC | Hty1IIIP |
| ??? | M | M.Hty6810ORF9525P (100% identity) | GTNNAC | M.Hty1III |
| 321 | 39 aa Hypothetical protein | |||
| 347 | putative | |||
| 348 | RM | Hty6810ORF5280P (100% identity) | Hty1ORF348P | |
| 349 | helicase domain protein | |||
| 397 | 72 aa Hypothetical protein | |||
| ??? | R | Hty6810ORF155P (100% identity) | GTAC | Hty1ORFBP |
| ??? | M | M.Hty6810ORF155P (100% identity) | GTAC | M.Hty1ORFBP |
| 405 | Adenylosuccinate lyase | |||
| 930 | FIG00469766: Hypothetical protein | |||
| 931 | R | Hsp1616ORF1260P (98% identity) | GATC | Hty1IIP |
| 932 | M | M.Hty6810ORF3565P (100% identity) | GATC | M.Hty1II |
| 933 | 495 aa Hypothetical protein, (pXO1-133) | |||
| 933 | 495 aa Hypothetical protein, (pXO1-133) | |||
| 934 | M | M.Hty1ORF1363P (80% identity) | GTSAC | M.Hty1ORF934P |
| 935 | ankyrin repeat protein, putative | |||
| 1362 | aldo-keto reductase | |||
| 1363 | M | M.HmuST1ORF8960P (76% identity) | GTSAC | M.Hty1ORF1363P |
| 1364 | R | Hty6810ORFAP (100% identity) | GTSAC | Hty1ORF1363P |
| 1365 | 4-carboxymuconolactone decarboxylase | |||
| 1371 | 376 aa Hypothetical protein | |||
| 1372 | M | M.Hty6810ORF7935P (100% identity) | CATG | M.Hty1ORF1372P |
| 1373 | Transcriptional regulator | |||
| 1374 | 54 aa Hypothetical protein | |||
| 1375 | R | Hty6810ORF7920P (43% identity) | Hty1ORF1376P | |
| 1376 | M | M.Hty6810ORF7920P (100% identity) | M.Hty1ORF1376P | |
| 1377 | Uncharacterized protein | |||
| 1514 | sodium-dependent transmembrane | |||
| 1515 | RM | Hty6810ORF9230P (100% identity) | Hty1ORF1515P | |
| 1516 | ABC transporter, periplasmic substrate-binding | |||
| 1540 | IMP cyclohydrolase / | |||
| ??? | RM | Hty6810ORF2445P (57% identity) | Hty1ORF1541P | |
| 1543 | 48 aa Hypothetical protein | |||
| 1701 | 83 aa Hypothetical protein | |||
| 1702 | M | M.Hty6810ORF4675P (100% identity) | M.Hty1ORF1702P | |
| 1703 | 144 aa Hypothetical protein | |||
| 1744 | 184 aa Hypothetical protein | |||
| 1745 | M | M.Hty6810ORF4885P (100% identity) | M.Hty1ORF1745P | |
| 1746 | two-component system sensor histidine | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 73 | G:T/U mismatch-specific uracil/thymine | |||
| 74 | R | Hty6810ORF2920P (100% identity) | Hty1ORF78P | |
| 75 | DNA-binding protein in cluster with | |||
| 76 | 185 aa Hypothetical protein | |||
| 77 | 215 aa Hypothetical protein | |||
| 78 | M | M.Hty6810ORF2920P (100% identity) | M.Hty1ORF78P | |
| 79 | 43 aa Hypothetical protein | |||