Peptoclostridium difficile Z31 |
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Putative Peptoclostridium difficile Z31 RM systems
Ref: Pereira,F.L. et al. unpublished
REBASE ref # 20871
Complete sequence: 4,298,263 bp
GenBank #: CP013196
REBASE acronym: PdiZ31
Org_num: 17434
All begin PCZ31_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1267 | D-tagatose-1,6-bisphosphate aldolase subunit | |||
| 1268 | M | M.Cdo002III (100% identity) | GCAYNNNNNNTTC | M.PdiZ31ORF1268P |
| 1269 | S | S.CdiCD37ORFCP (100% identity) | GCAYNNNNNNTTC | S.PdiZ31ORF1268P |
| 1270 | 102 aa hypothetical protein | |||
| 1271 | 126 aa hypothetical protein | |||
| 1272 | 142 aa hypothetical protein | |||
| ??? | R | CdiEW46IIIP (100% identity) | GCAYNNNNNNTTC | PdiZ31ORF1268P |
| 1274 | 687 aa hypothetical protein | |||
| 3868 | 550 aa hypothetical protein | |||
| 3869 | C | C.RspMA18ORF15820P (100% identity) | C.PdiZ31ORF3870P | |
| 3870 | M | M.Cor28571ORF3790P (100% identity) | M.PdiZ31ORF3870P | |
| 3871 | S | S.Cor28571ORF3790P (100% identity) | S.PdiZ31ORF3870P | |
| 3872 | 116 aa hypothetical protein | |||
| 3873 | 250 aa hypothetical protein | |||
| 3874 | R | Cor28571ORF3790P (97% identity) | PdiZ31ORF3870P | |
| 3875 | 299 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 413 | 53 aa hypothetical protein | |||
| 414 | C | C.Cdo002IVP (100% identity) | C.PdiZ31ORF415P | |
| ??? | RM | CdiCD37ORFAP (99% identity) | GCMGAAG | PdiZ31ORF415P |
| 419 | 224 aa hypothetical protein | |||
| 1540 | Transcriptional regulator | |||
| 1541 | M | M.Pdi6602ORF700039P (100% identity) | CAAAAA | M.PdiZ31ORF1541P |
| 1542 | NTE family protein RssA | |||
| 1644 | 111 aa hypothetical protein | |||
| 1645 | M | M.Pdi6600ORF970001P (100% identity) | M.PdiZ31ORF1645P | |
| 1646 | 69 aa hypothetical protein | |||
| 3509 | AAA-like domain protein | |||
| ??? | M | M.CdiCD37ORFDP (100% identity) | CCSSGG | M.PdiZ31ORF3510P |
| 3511 | 191 aa hypothetical protein | |||
| 3847 | 262 aa hypothetical protein | |||
| 3848 | M | M.RspMA18ORF15700P (96% identity) | GGCC | M.PdiZ31ORF3848P |
| 3849 | DNA adenine methyltransferase YhdJ | |||
| 3848 | BsuMI modification methylase subunit | |||
| 3849 | M | M.Bsh18435ORF23405P (99% identity) | M.PdiZ31ORF3849P | |
| 3850 | S-adenosylmethionine synthase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2432 | 57 aa hypothetical protein | |||
| 2433 | R | CdiM161McrBP (92% identity) | PdiZ31McrBP | |
| 2434 | McrBC 5-methylcytosine restriction system | |||
| 2435 | R | McrBC 5-methylcytosine restriction system component family protein | PdiZ31McrCP | |
| 2436 | Transcriptional regulatory protein ZraR | |||