Salmonella enterica subsp. enterica serovar Heidelberg N13-01290 |
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Putative Salmonella enterica subsp. enterica serovar Heidelberg N13-01290 RM systems
Ref: Labbe,G. et al. unpublished
REBASE ref # 21355
| Sequence length: | GenBank #: | |
| Chromosome: | 4,809,628 bp | CP012930 |
| plasmid pN13-01290_23: | 236,176 bp | CP012931 |
| plasmid pN13-01290_98: | 98,999 bp | CP012936 |
REBASE acronym: Sen1290
Org_num: 17406
All begin APS44_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22850 | 110 aa hypothetical protein | |||
| 22855 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen1290ORF22860P |
| 22860 | M | M.Sens12373ORF19415P (100% identity) | GAGNNNNNNRTAYG | M.Sen1290ORF22860P |
| 22865 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen1290ORF22860P |
| 22870 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5230 | 79 aa hypothetical protein | |||
| 5235 | M | M.Sens12373ORF14090P (100% identity) | GATC | M.Sen1290ORF5235P |
| 5240 | exonuclease | |||
| 10260 | multidrug DMT transporter | |||
| 10265 | V | V.StyTDcmP (100% identity) | V.Sen1290DcmP | |
| 10270 | M | M.SenZ223DcmP (100% identity) | CCWGG | M.Sen1290DcmP |
| 10275 | hydrolase | |||
| 16420 | replication protein A | |||
| 16425 | M | M.SenS686ORF2360P (99% identity) | GATC | M.Sen1290ORF16425P |
| 16430 | 109 aa hypothetical protein | |||
| 17310 | Fis family transcriptional regulator | |||
| 17315 | M | methyltransferase | ATGCAT | M.Sen1290ORF17315P |
| 17320 | 54 aa hypothetical protein | |||
| 17800 | ribulose phosphate epimerase | |||
| 17805 | M | DNA adenine methylase | GATC | M.Sen1290DamP |
| 17810 | cell division protein DamX | |||
| 22685 | helicase | |||
| 22690 | RM | Sens12373ORF19575P (100% identity) | GATCAG | Sen1290ORF22690P |
| plasmid pN13-01290_23 | ||||
| 24065 | 108 aa hypothetical protein | |||
| 24070 | M | M.YpsF1ORFBP (100% identity) | M.Sen1290ORF24070P | |
| 24075 | 202 aa hypothetical protein | |||
| 24215 | DNA-binding protein | |||
| ??? | M | M.YpsF1ORFDP (100% identity) | M.Sen1290ORF24220P | |
| 24225 | 277 aa hypothetical protein | |||
| 24910 | 55 aa hypothetical protein | |||
| 24915 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.Sen1290ORF24915P |
| 24920 | nuclease | |||
| plasmid pN13-01290_98 | ||||
| 23410 | 308 aa hypothetical protein | |||
| 23415 | M | M.StyR64ORFAP (100% identity) | M.Sen1290ORF23415P | |
| 23420 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2150 | sugar transporter | |||
| 2155 | M | M.SenZ223ORF2150P (100% identity) | CAGAG | M.Sen1290ORF2155P |
| 2160 | R | Sens12373ORF17180P (99% identity) | CAGAG | Sen1290ORF2155P |
| 2165 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22865 | DEAD/DEAH box helicase | |||
| 22870 | R | StyUK1MrrP (100% identity) | Sen1290MrrP | |
| 22875 | 95 aa hypothetical protein | |||