Salmonella enterica subsp. enterica serovar Heidelberg 12-4374 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Heidelberg 12-4374 RM systems
Ref: Labbe,G. et al. unpublished
REBASE ref # 21355
| Sequence length: | GenBank #: | |
| Chromosome: | 4,790,331 bp | CP012924 |
| plasmid p12-4374_62: | 62,920 bp | CP012928 |
| plasmid p12-4374_96: | 96,042 bp | CP012929 |
REBASE acronym: Sen4374
Org_num: 17405
All begin APS45_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22730 | 110 aa hypothetical protein | |||
| 22735 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen4374ORF22740P |
| 22740 | M | M.Sens12373ORF19415P (100% identity) | GAGNNNNNNRTAYG | M.Sen4374ORF22740P |
| 22745 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen4374ORF22740P |
| 22750 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5225 | 79 aa hypothetical protein | |||
| 5230 | M | M.Sens12373ORF14090P (100% identity) | GATC | M.Sen4374ORF5230P |
| 5235 | exonuclease | |||
| 10260 | multidrug DMT transporter | |||
| 10265 | V | V.StyTDcmP (100% identity) | V.Sen4374DcmP | |
| 10270 | M | M.SenZ223DcmP (100% identity) | CCWGG | M.Sen4374DcmP |
| 10275 | hydrolase | |||
| 13170 | 355 aa hypothetical protein | |||
| 13175 | M | M.Sph9TCWORF31P (100% identity) | GATC | M.Sen4374ORF13175P |
| 13180 | 59 aa hypothetical protein | |||
| 17190 | Fis family transcriptional regulator | |||
| 17195 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen4374ORF17195P |
| 17200 | 54 aa hypothetical protein | |||
| 17680 | ribulose phosphate epimerase | |||
| 17685 | M | M.StyTDamP (100% identity) | GATC | M.Sen4374DamP |
| 17690 | cell division protein DamX | |||
| 22565 | helicase | |||
| 22570 | RM | Sens12373ORF19575P (100% identity) | GATCAG | Sen4374ORF22570P |
| plasmid p12-4374_62 | ||||
| 23945 | 73 aa hypothetical protein | |||
| 23950 | M | M.Sen527ORF25750P (100% identity) | M.Sen4374ORF23950P | |
| 23955 | recombinase | |||
| plasmid p12-4374_96 | ||||
| 23270 | 308 aa hypothetical protein | |||
| 23275 | M | M.StyR64ORFAP (100% identity) | M.Sen4374ORF23275P | |
| 23280 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2145 | sugar transporter | |||
| 2150 | M | M.SenZ223ORF2150P (100% identity) | CAGAG | M.Sen4374ORF2150P |
| 2155 | R | Sens12373ORF17180P (99% identity) | CAGAG | Sen4374ORF2150P |
| 2160 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22745 | DEAD/DEAH box helicase | |||
| 22750 | R | StyUK1MrrP (100% identity) | Sen4374MrrP | |
| 22755 | 95 aa hypothetical protein | |||