Geobacter lovleyi SZ |
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Putative Geobacter lovleyi SZ RM systems
Ref: Lucas,S. et al. unpublished
REBASE ref # 10663
| Sequence length: | GenBank #: | |
| Chromosome: | 3,917,761 bp | CP001089 (NC_010814) |
| plasmid pGLOV01: | 77,113 bp | CP001090 (NC_010815) |
REBASE acronym: GloSZ
Org_num: 5102
All begin Glov_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 634 | nitrogen fixation protein NifX | |||
| 635 | R | GspEPRMORF9300P (81% identity) | GloSZORF636P | |
| 636 | M | M.GspEPRMORF9300P (86% identity) | M.GloSZORF636P | |
| 637 | S | S1.Pch7ORF11835P (51% identity) | S.GloSZORF636P | |
| 638 | transcriptional regulator | |||
| 842 | Na+/H+ antiporter NhaA | |||
| 843 | R | LspCT6ORF5950P (81% identity) | GloSZORF849P | |
| 844 | S | S.Csp727ORF11520P (39% identity) | S.GloSZORF849P | |
| 845 | 135 aa hypothetical protein | |||
| 846 | 255 aa hypothetical protein | |||
| 847 | transposase IS204/IS1001/IS1096/IS1165 family | |||
| 848 | 204 aa hypothetical protein | |||
| 849 | M | M2.PspHLS6ORF24675P (77% identity) | M2.GloSZORF849P | |
| 850 | M | M1.Pae14978ORFBP (84% identity) | M1.GloSZORF849P | |
| 851 | filamentation induced by cAMP protein Fic | |||
| 1413 | 164 aa conserved hypothetical protein | |||
| 1414 | S | S.TruRU1ORF4960P (34% identity) | S.GloSZORF1415P | |
| 1415 | M | M.GsuYM35ORF16640P (88% identity) | M.GloSZORF1415P | |
| 1416 | R | GsuYM35ORF16640P (89% identity) | GloSZORF1415P | |
| 1417 | 259 aa conserved hypothetical protein | |||
| 2196 | thioesterase superfamily protein | |||
| 2197 | R | SspADCORFAP (63% identity) | GloSZORF2201P | |
| 2198 | Appr-1-p processing domain protein | |||
| 2199 | 213 aa conserved hypothetical protein | |||
| 2200 | S | S.Tsp28ORFDP (44% identity) | S.GloSZORF2201P | |
| 2201 | M | M.Mho15978ORF633P (63% identity) | M.GloSZORF2201P | |
| 2202 | acyl transferase region | |||
| 3511 | ABC transporter related | |||
| 3512 | R | GpiG13IP (86% identity) | GloSZORF3517P | |
| 3513 | 63 aa hypothetical protein | |||
| 3514 | Excinuclease ABC C subunit domain protein | |||
| 3515 | S | S.Nsp527ORF2480P (44% identity) | S.GloSZORF3517P | |
| 3516 | protein of unknown function DUF1016 | |||
| 3517 | M | M.GpiG13I (92% identity) | M.GloSZORF3517P | |
| 3518 | 75 aa conserved hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 293 | Non-specific serine/threonine protein kinase | |||
| 294 | R | Bsp389ORF240P (60% identity) | CCWGG | GloSZORF298P |
| 295 | V | V.ObaTAV5ORF28690P (57% identity) | V.GloSZORF298P | |
| 296 | 99 aa hypothetical protein | |||
| 297 | 77 aa hypothetical protein | |||
| 298 | M | M.ObaTAV1ORF308P (64% identity) | CCWGG | M.GloSZORF298P |
| 299 | pseudogene | |||
| 301 | histidine kinase | |||
| 302 | M | M.GspOR1ORF663P (81% identity) | M.GloSZORF302P | |
| 303 | 125 aa hypothetical protein | |||
| 2978 | protein of unknown function DUF323 | |||
| 2979 | M | M.GurSL11ORF13760P (72% identity) | M.GloSZORF2979P | |
| 2980 | 130 aa hypothetical protein | |||
| plasmid pGLOV01 | ||||
| 3685 | histone family protein DNA-binding protein | |||
| 3686 | RM | SspTT6ORF22555P (53% identity) | GloSZORF3686P | |
| 3687 | transcriptional regulator, XRE family | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 115 | 33 aa hypothetical protein | |||
| 116 | R | restriction endonuclease | GloSZMrrP | |
| 117 | transposase IS4 family protein | |||
| 289 | WGR domain protein | |||
| 290 | R | Zfo19928McrBP (14% identity) | GloSZMcrBP | |
| 291 | 538 aa conserved hypothetical protein | |||