Vibrio cholerae O1 KW3 |
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Putative Vibrio cholerae O1 KW3 RM systems
Ref: Bashir,A. et al. Nat. Biotechnol. 30 (7), 701-707 (2012)
REBASE ref # 20656
| Sequence length: | GenBank #: | |
| chromosome I: | 3,041,360 bp | CP006947 |
| chromosome II: | 1,047,660 bp | CP006948 |
REBASE acronym: VchKW3
Org_num: 17192
All begin N900_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 5485 | 687 aa hypothetical protein | |||
| 5490 | M | M.VspNIH41ORF1746P (100% identity) | AAGNNNNNNCATC | M.VchKW3ORF5490P |
| 5495 | S | S.VspNIH41ORF1746P (99% identity) | AAGNNNNNNCATC | S.VchKW3ORF5490P |
| 5500 | 470 aa hypothetical protein | |||
| 5505 | 663 aa hypothetical protein | |||
| 5510 | R | VspNIH41ORF1746P (100% identity) | AAGNNNNNNCATC | VchKW3ORF5490P |
| 5515 | membrane protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome I | ||||
| 1370 | cell division protein DamX | |||
| 1375 | M | M.VspNIH41DamP (100% identity) | GATC | M.VchKW3DamP |
| 1380 | ribulose-phosphate 3-epimerase | |||
| 11140 | alkaline phosphatase | |||
| 11145 | RM | VchPC1ORF10795P (100% identity) | VchKW3ORF11145P | |
| 11150 | 1229 aa hypothetical protein | |||
| chromosome II | ||||
| 14840 | guanosine 5-monophosphate oxidoreductase | |||
| 14845 | M | M.VspNIH41ORF700P (100% identity) | RCCGGY | M.VchKW3ORF14845P |
| 14850 | 638 aa hypothetical protein | |||
| 15775 | hemagglutinin | |||
| 15780 | M | M.VspNIH41ORF3529P (94% identity) | M.VchKW3ORF15780P | |
| 15785 | 141 aa hypothetical protein | |||