Haladaptatus cibarius D43 |
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Putative Haladaptatus cibarius D43 RM systems
Ref: Lee,H.W. et al. Stand Genomic Sci 10, 53 (2015)
REBASE ref # 20524
Contig set: 3,926,724 bp
GenBank #: JDTH00000000 (NZ_JDTH00000000)
REBASE acronym: HciD43
Org_num: 17142
All begin ORF_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1 | RM | RM3.Hro15501ORF16355P (42% identity) | HciD43ORFMP | |
| 4 | 162 aa hypothetical protein | |||
| 1 | RM | Hda313ORF7020P (25% identity) | HciD43ORFKP | |
| 106 | 205 aa hypothetical protein | |||
| 112 | RM | Hli7737ORF3809P (87% identity) | HciD43ORFIP | |
| 122 | 63 aa hypothetical protein | |||
| 182 | 348 aa hypothetical protein | |||
| 183 | M | M.SspJ43ORFBP (54% identity) | GATC | M.HciD43ORFJP |
| 184 | 115 aa hypothetical protein | |||
| 271 | helicase SNF2 | |||
| 280 | RM | Hsp124ORFDP (45% identity) | HciD43ORFLP | |
| 1464 | 110 aa hypothetical protein | |||
| 1467 | R | BsiWI | CGTACG | HciD43ORFHP |
| 1469 | M | M.HspGX21ORFDP (73% identity) | CGTACG | M.HciD43ORFHP |
| 1473 | 67 aa hypothetical protein J07HQW2_02466 | |||
| 1876 | 109 aa hypothetical protein | |||
| 1878 | M | M.Sja16327ORFCP (69% identity) | CCCGC | M.HciD43ORFGP |
| 1882 | 76 aa hypothetical protein | |||
| 3533 | 106 aa hypothetical protein | |||
| 3539 | M | M.Hsp1113ORF9035P (72% identity) | M.HciD43ORFFP | |
| 3542 | nucleoside-diphosphate sugar epimerase | |||
| 5261 | 172 aa conserved hypothetical protein | |||
| ??? | M | M.NspCGA73ORFFP (43% identity) | GATC | M.HciD43ORFDP |
| 5268 | 275 aa hypothetical protein | |||
| 7761 | 3-dehydroquinate dehydratase | |||
| 7762 | M | M.Hli7737ORF366P (95% identity) | CTAG | M.HciD43ORFCP |
| 7767 | 249 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 225 | 121 aa hypothetical protein | |||
| 231 | R | HspDFY28McrBP (33% identity) | HciD43McrBP | |
| 235 | R | HspDFY28McrCP (55% identity) | HciD43McrCP | |
| 242 | MarR family transcriptional regulator | |||