Escherichia coli CR48 |
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Putative Escherichia coli CR48 RM systems
Ref: Sidjabat,H.E. et al. Genome Announc 3 (4), e00983-15 (2015)
REBASE ref # 20492
Contig set: 5,184,489 bp
GenBank #: LFXT00000000 (NZ_LFXT00000000)
REBASE acronym: EcoCR48
Org_num: 17175
All begin ORF_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 466 | 103 aa hypothetical protein | |||
| ??? | M | M.EcoZ247ORF19790P (100% identity) | M.EcoCR48ORFEP | |
| 472 | S | S.EcoZ247ORF19790P (100% identity) | S.EcoCR48ORFEP | |
| 473 | R | EcoT219ORF19770P (100% identity) | EcoCR48ORFEP | |
| 478 | 237 aa hypothetical protein | |||
| 635 | 63 aa hypothetical protein | |||
| 636 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoCR48ORFFP |
| 643 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoCR48ORFFP |
| 647 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoCR48ORFFP |
| 648 | 217 aa hypothetical protein | |||
| 624 | molecular chaperone Tir | |||
| 626 | M | M.EcoW004ORF18655P (100% identity) | M.EcoCR48ORFDP | |
| 628 | S | S.EcoW004ORF18655P (100% identity) | S.EcoCR48ORFDP | |
| 629 | membrane protein | |||
| 630 | 117 aa hypothetical protein | |||
| 631 | R | EcoW004ORF18655P (99% identity) | EcoCR48ORFDP | |
| 635 | 165 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9 | ATPase-like protein | |||
| 15 | RM | EcosR9ORF15335P (100% identity) | CANCATC | EcoCR48ORFGP |
| 19 | TIGR02687 family protein | |||
| 23 | 59 aa hypothetical protein | |||
| 24 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoCR48ORFCP |
| 27 | DNA-binding protein fis | |||
| 84 | 103 aa hypothetical protein | |||
| 88 | M | M.Sfl7ORF23565P (100% identity) | M.EcoCR48ORFHP | |
| 93 | 73 aa hypothetical protein | |||
| 388 | multidrug DMT transporter | |||
| ??? | V | V.SflC32DcmP (74% identity) | V.EcoCR48DcmP | |
| 393 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoCR48DcmP |
| 395 | 231 aa hypothetical protein EC958_2227 | |||
| 1318 | 71 aa hypothetical protein | |||
| 1319 | M | M.KaeCRE8ORF15605P (100% identity) | M.EcoCR48ORFBP | |
| 1322 | DNA-binding helix-turn-helix protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 458 | filamentation induced by cAMP protein Fic | |||
| 462 | R | EcoW004GmrDP (100% identity) | EcoCR48GmrDP | |
| 467 | 784 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 108 | ribulose-phosphate 3-epimerase | |||
| 109 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoCR48ORFAP |
| 111 | cell division protein DamX | |||