Xanthomonas oryzae pv. oryzae PXO99A |
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Putative Xanthomonas oryzae pv. oryzae PXO99A RM systems
Ref: Salzberg,S.L. et al. BMC Genomics 9 (1), 204 (2008)
REBASE ref # 10645
Complete sequence: 5,238,555 bp
GenBank #: CP000967 (NC_010717)
REBASE acronym: Xor99A
Org_num: 5091
All begin PXO_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2077 | 88 aa hypothetical protein | |||
| 2076 | S | S1.Xor79ORF17790P (100% identity) | S.Xor99AORF2073AP | |
| 2075 | IS1112 transposase | |||
| 2074 | S | S1.Xor16ORFDP (32% identity) | S.Xor99AORF2073BP | |
| 2073 | M | M.Xor99AgORF16805P (100% identity) | M.Xor99AORF2073P | |
| 2072 | 240 aa hypothetical protein | |||
| 2071 | 152 aa hypothetical protein | |||
| 2070 | R | Xor99AgORF16805P (100% identity) | Xor99AORF2073P | |
| 2069 | plasmid stabilization system | |||
| 2067 | DNA-entry nuclease precursor | |||
| 2066 | R | XorCIATORF17140P (100% identity) | TACNNNNNNNTGTC | Xor99AORF2064P |
| 2065 | abortive infection bacteriophage resistance | |||
| 2064 | M | M.Xor99AgORF16845P (100% identity) | TACNNNNNNNTGTC | M.Xor99AORF2064P |
| 2063 | S | S.Xor79ORF17830P (100% identity) | TACNNNNNNNTGTC | S.Xor99AORF2064P |
| 2062 | plasmid stabilization system | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4736 | ISXoo6 transposase | |||
| 4735 | M | M.Xor79ORF6965P (100% identity) | CGGCCG | M.Xor99AXII |
| 4734 | ISXoo13 transposase | |||
| 4733 | R | Xor16IIP (100% identity) | CGGCCG | Xor99AXIIP |
| 4731 | transposase TnpA, ISL3 family | |||
| 1366 | 80 aa hypothetical protein | |||
| 1365 | M | M.Xor99AgORF15365P (100% identity) | M.Xor99AORF1365P | |
| 1364 | phage portal protein, pbsx family | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3953 | haloalkane dehalogenase | |||
| 3954 | R | XorYN24ORF9770P (100% identity) | CCGAGG | Xor99AXIP |
| 3955 | M | M.XorYN24ORF9770P (100% identity) | CCGAGG | M.Xor99AXI |
| 3956 | Fic protein family | |||