Xanthomonas campestris pv. campestris B100 |
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Putative Xanthomonas campestris pv. campestris B100 RM systems
Ref: Vorholter,F.J. et al. J. Biotechnol. 134 (1-2), 33-45 (2008)
REBASE ref # 10542
Complete sequence: 5,079,002 bp
GenBank #: AM920689 (NC_010688)
REBASE acronym: XcaB
Org_num: 5023
All begin xcc-b100_, XCCB100_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1247 | 248 aa hypothetical protein | |||
| 1248 | R | XcaYORFCP (95% identity) | XcaBORF1251P | |
| 1249 | S | S.Xcacc2ORF6130P (100% identity) | S.XcaBORF1251P | |
| 1250 | DNA-related protein | |||
| 1251 | M | M.Xcacc2ORF6130P (100% identity) | M.XcaBORF1251P | |
| 1252 | 195 aa hypothetical protein | |||
| 3276 | 98 aa hypothetical protein | |||
| 3277 | R | XcaYORFFP (100% identity) | XcaBORF3280P | |
| 3278 | S | S.Xcacc2ORF16555P (100% identity) | S.XcaBORF3280P | |
| 3279 | 360 aa hypothetical protein | |||
| 3280 | M | M.XcaYORFFP (100% identity) | M.XcaBORF3280P | |
| 3281 | Mrr restriction endonuclease, probable | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 618 | IS1404 transposase | |||
| 619 | R | Xcacc2ORF20495P (69% identity) | R1.XcaBORF619P | |
| ??? | R | XcaXca5ORFEP (31% identity) | R2.XcaBORF619P | |
| 621 | 90 aa hypothetical protein | |||
| 2399 | DNA helicase | |||
| 2400 | RM | XcaSB80ORF10635P (100% identity) | XcaBORF2400P | |
| 2401 | IS1477 transposase ORFA | |||
| 2412 | DNA topoisomerase III | |||
| 2413 | M | M.XcaYORFEP (62% identity) | M.XcaBORF2413P | |
| 2415 | 219 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1059 | 861 aa hypothetical protein | |||
| 1060 | M | M.XcaYORFBP (100% identity) | M.XcaBORF1060P | |
| 1061 | R | XcaYORFBP (100% identity) | XcaBORF1060P | |
| 1062 | 177 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3280 | Type I site-specific deoxyribonuclease | |||
| 3281 | R | XcaYMrrP (100% identity) | XcaBMrr2P | |
| 3282 | 100 aa hypothetical protein | |||
| 4405 | pseudouridylate synthase | |||
| 4406 | R | XcaYMrr2P (90% identity) | XcaBMrrP | |
| 4407 | 57 aa hypothetical protein | |||