Ref: Vorholter,F.J. et al. J. Biotechnol. 134 (1-2), 33-45 (2008)

REBASE ref # 10542

Complete sequence: 5,079,002 bp

GenBank #: AM920689 (NC_010688)

REBASE acronym: XcaB

Org_num: 5023

 

All begin xcc-b100_, XCCB100_

Type I
ORF Gene Most similar Specificity Name
 
1247 248 aa hypothetical protein
1248 R XcaXCC1IIP (95% identity) XcaBORF1251P
1249 S S.Xcacc2ORF6130P (100% identity) S.XcaBORF1251P
1250 DNA-related protein
1251 M M.Xcacc2ORF6130P (100% identity) M.XcaBORF1251P
1252 195 aa hypothetical protein
 
3276 98 aa hypothetical protein
3277 R XcaXCC1IP (100% identity) XcaBORF3280P
3278 S S.Xcacc2ORF16555P (100% identity) S.XcaBORF3280P
3279 360 aa hypothetical protein
3280 M M.XcaXCC1I (100% identity) M.XcaBORF3280P
3281 Mrr restriction endonuclease, probable
Type II
ORF Gene Most similar Specificity Name
 
618 IS1404 transposase
619 R XcaXCC1ORFHP (100% identity) R1.XcaBORF619P
??? R XcaXca5ORFEP (31% identity) R2.XcaBORF619P
621 90 aa hypothetical protein
 
2399 DNA helicase
2400 RM XcaSB80ORF10635P (100% identity) XcaBORF2400P
2401 IS1477 transposase ORFA
 
2412 DNA topoisomerase III
2413 M M.XcaXCC1ORFFP (62% identity) M.XcaBORF2413P
2415 219 aa hypothetical protein
Type III
ORF Gene Most similar Specificity Name
 
1059 861 aa hypothetical protein
1060 M M.XcaXCC1ORFAP (100% identity) M.XcaBORF1060P
1061 R XcaXCC1ORFAP (100% identity) XcaBORF1060P
1062 177 aa hypothetical protein
Type IV
ORF Gene Most similar Specificity Name
 
3280 Type I site-specific deoxyribonuclease
3281 R XcaXCC1Mrr2P (100% identity) XcaBMrr2P
3282 100 aa hypothetical protein
 
4405 pseudouridylate synthase
4406 R XcaSB80MrrP (100% identity) XcaBMrrP
4407 57 aa hypothetical protein