Haemophilus influenzae HI2004 |
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Putative Haemophilus influenzae HI2004 RM systems
Ref: VanWagoner,T.M. et al. Genome Announc 3 (5), e00899-15 (2015)
REBASE ref # 20425
Contig set: 1,773,636 bp
GenBank #: LFFQ00000000 (NZ_LFFQ00000000)
REBASE acronym: Hin2004
Org_num: 17161
All begin ABN75_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3660 | oligopeptidase A | |||
| 3665 | M | M.Hin56H1ORF236P (100% identity) | M.Hin2004ORF3665P | |
| 3670 | S | S.HinP3EMOORF7185P (100% identity) | S.Hin2004ORF3665P | |
| 3675 | anticodon nuclease | |||
| 3680 | 2-hydroxyacid dehydrogenase | |||
| 3685 | R | HinP3EMOORF7185P (100% identity) | Hin2004ORF3665P | |
| 3690 | membrane protein | |||
| 6990 | metal-binding protein | |||
| 6995 | M | M.HinIII5ORF9100P (100% identity) | M.Hin2004ORF6995P | |
| 7000 | ATPase | |||
| 7005 | S | S.HinR535ORF4005P (100% identity) | S.Hin2004ORF6995P | |
| 7010 | R | HinR535ORF4005P (100% identity) | Hin2004ORF6995P | |
| 7015 | signal recognition particle | |||
| 680 | ribosome-binding factor A | |||
| ??? | M | M.HinIII5ORF11700P (100% identity) | M.Hin2004ORF685P | |
| 690 | S | S.HinR535ORF90P (100% identity) | S.Hin2004ORF685P | |
| 695 | pseudogene | |||
| 700 | R | HinR535ORF90P (100% identity) | Hin2004ORF685P | |
| 705 | translation initiation factor IF-2 | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3940 | pseudogene | |||
| 3945 | M | M.HinR2846ORFBP (100% identity) | M.Hin2004ORF3945P | |
| 3950 | R | HinR2846ORFBP (100% identity) | Hin2004ORF3945P | |
| 3955 | 470 aa hypothetical protein | |||
| 8445 | 3-phosphoshikimate 1-carboxyvinyltransferase | |||
| 8450 | M | M.HinIII5ORF14360P (100% identity) | CGCG | M.Hin2004ORF8450P |
| 8455 | R | HinR2846ORFAP (100% identity) | CGCG | Hin2004ORF8450P |
| 8460 | recombination factor protein RarA | |||
| 1725 | 23S rRNA methyltransferase | |||
| ??? | M | M.Hin8881ORF3485P (100% identity) | M.Hin2004ORF1730P | |
| 1735 | histidine kinase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4790 | ribonuclease HII | |||
| 4795 | M | M.Hin1988ORF4105P (99% identity) | CGAG | M.Hin2004ORF4795P |
| 4800 | R | HinIII5ORF16620P (100% identity) | CGAG | Hin2004ORF4795P |
| 4805 | 113 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3630 | 3-dehydroquinate synthase | |||
| 3635 | M | M.HinR548Dam (100% identity) | GATC | M.Hin2004ORF3635P |
| 3640 | phosphatidylglycerophosphatase | |||